Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1447 ATGTCAAACATCACAAGTTGTGATAGTGGGAGCTTCTCTACAGAAAATACTAGAGAAGATGCAGTTAAACAGCAACAAACAGATCAAATACTTGGTCAATTTCATAGTCCACATTCTCATACTTCAACAACAACAACAACAAATAATAATAGCAATGGTTCCAATACAAATTTACAACCACCACTTAAGAAGAAAAGGAACCTACCAGGAAATCCAGATCCAAGTGCTGAAGTGATAGCACTATCACCAACAACACTAATGGCTACAAACAGATTCGTATGTGAAATATGTAACAAAGGTTTTCAAAGAGACCAAAATCTTCAACTGCACCGAAGAGGACACAATTTGCCATGGAAGCTTAAACAGAGAACAAGTGCAGAAATTAGAAAGAGGGTTTATGTTTGTCCTGAACCTTCATGTGTTCACCATAACCCTGCAAGAGCACTTGGTGATCTTACTGGTATTAAAAAGCACTTTTGTAGAAAACATGGTGAGAAAAAGTGGAAATGTGATAAGTGTTCTAAGAAATATGCTGTTCAATCTGATTGGAAAGCTCATTCTAAAATCTGTGGTACAAGGGAATACAAATGTGATTGTGGAACAATCTTTTCCAGAAGAGATAGCTTCATAACCCATAGAGCTTTCTGTGACGCATTAGCTGAAGAGAACAACAAAGCCAACGAAGGAGTACTATCAAACTTGCAATGCCAACCAATCCAAAACCATGTTCCCTCATTACCTTTAAACAACATTCATAACCCACAAATTGGTGCAACTTCATCAGAATTCAACAACCATTCAGATATTAAACATCCATTATCATCACCTCATGAGCTCATGTCAGTGCCTGCAAAACCCTTCAACAACAACATATTCACTAGAAGCCTTTCATCATCAACTTCATCTCCTTCTCTTCAGCTGAGTTCAAATAATTCACTCAACAACATCTTGGAAGAAAATGGATCACTTCATTTATCTGCTGCAACTTCACCTCACATGTCAGCTACTGCATTGCTGCAAAAAGCTGCTCAAATGGGTGCAACTGTGAGTAATAATAATGGAGGTGTTATGACAGATAAAACAACCGTTGCTACAAACATGGCGCCGCCGCTATTCGGTGTGGTGCAGCAACAAGGACATGCTTTCATGAACCACTACATGCAGCAACAACAACAGCCTCAGTATAATAATAATAATTTCAATGCAAATGGGATAATAAATGGAGGTGTTGGAATGAATGGAGTTGATATGTTTAATGCTATATTGGATCAAAGTAAGGCTTTATCGAAGATCATTGAACAGAACAATCAAACTCAAAGCATTAATAATAGTGGAGGAGTAGGAGTAGGAGGAGGAGGTGCATCAAGTAATAATAATGTTGTTATGAACATTGGTGGAAGTAAGGGAAGTGGTGGAGATGTAATGACGCTGGATTTGTTGGGGATAGGAGGAGGGGGTGCACATAGTAATTTCTATGGAGGGGGTACACAACAACAACAGGCAGAAAGTGCTGCAGCTGCAGCAGATGAGGTTTGGAGAAATTGGTCAACCAAGAATGGAGGGTTTGAAACATTTTCAGCAACAAGCAACATTTGA 1596 0.3878 MSNITSCDSGSFSTENTREDAVKQQQTDQILGQFHSPHSHTSTTTTTNNNSNGSNTNLQPPLKKKRNLPGNPDPSAEVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSAEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTIFSRRDSFITHRAFCDALAEENNKANEGVLSNLQCQPIQNHVPSLPLNNIHNPQIGATSSEFNNHSDIKHPLSSPHELMSVPAKPFNNNIFTRSLSSSTSSPSLQLSSNNSLNNILEENGSLHLSAATSPHMSATALLQKAAQMGATVSNNNGGVMTDKTTVATNMAPPLFGVVQQQGHAFMNHYMQQQQQPQYNNNNFNANGIINGGVGMNGVDMFNAILDQSKALSKIIEQNNQTQSINNSGGVGVGGGGASSNNNVVMNIGGSKGSGGDVMTLDLLGIGGGGAHSNFYGGGTQQQQAESAAAAADEVWRNWSTKNGGFETFSATSNI* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1447 531 Pfam Zinc finger, C2H2 type 92 114 IPR013087 -
Mal1g1447 531 MobiDBLite consensus disorder prediction 1 62 - -
Mal1g1447 531 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 4 506 - -
Mal1g1447 531 Gene3D Classic Zinc Finger 147 226 - -
Mal1g1447 531 SUPERFAMILY beta-beta-alpha zinc fingers 91 188 IPR036236 -
Mal1g1447 531 MobiDBLite consensus disorder prediction 1 75 - -
Mal1g1447 531 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 4 506 - -
Mal1g1447 531 ProSitePatterns Zinc finger C2H2 type domain signature. 94 114 IPR013087 -
Mal1g1447 531 ProSiteProfiles Zinc finger C2H2 type domain profile. 92 114 IPR013087 -
Mal1g1447 531 Gene3D Classic Zinc Finger 71 137 - -
Mal1g1447 531 SMART c2h2final6 168 188 IPR013087 -
Mal1g1447 531 SMART c2h2final6 133 163 IPR013087 -
Mal1g1447 531 SMART c2h2final6 92 114 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1447 Mal-Chr1 18600947 18604678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1447 42 350 IDZ Gene Family AT3G50700 55.814 1.12e-117 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal1g1447 zf-C2H2 0.0054 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1447 - - gmx:100813556 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1447 1 18600947 18604678 Mal1g1447 1 18600947 18604678 ECH