Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1445 ATGAACGATGGTGAGGGAGATAAAACGTTGCCCATAGCGAATGTGGGTAGAATAATGAAGCAAAATCTTCCTCCAAATGCAAAGATCTCAAAAGAAAGCAAACAGTTGATGCAAGAATGTGCGACAGAGTTCATAAGTTTCGTGACAGGTGAAGCATCTGACAAGTGTCACAAGGAGAATCGCAAGACCGTTAATGGAGATGATATTTGTTGGGCTTTGTGTTCGTTAGGGTTTAATAACTATGCTGAAGCTATTGGAAGGTACTTGTATAAATTCAGACAAGCTGAAATTGCTAGAATGAATCAGAACAAACTTAAGACTGCAAAAGGAGATTCAACAAATCCAAGTACCAATTACATACATGAGAAGGAATAA 375 0.3813 MNDGEGDKTLPIANVGRIMKQNLPPNAKISKESKQLMQECATEFISFVTGEASDKCHKENRKTVNGDDICWALCSLGFNNYAEAIGRYLYKFRQAEIARMNQNKLKTAKGDSTNPSTNYIHEKE* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1445 124 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 9 73 IPR003958 -
Mal1g1445 124 Gene3D Histone, subunit A 1 124 IPR009072 GO:0046982
Mal1g1445 124 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-4 1 114 - -
Mal1g1445 124 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 114 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mal1g1445 124 ProSitePatterns NF-YB/HAP3 subunit signature. 40 56 IPR003956 GO:0005634|GO:0006355|GO:0043565
Mal1g1445 124 PRINTS CCAAT-binding transcription factor subunit A signature 37 55 - -
Mal1g1445 124 PRINTS CCAAT-binding transcription factor subunit A signature 75 93 - -
Mal1g1445 124 PRINTS CCAAT-binding transcription factor subunit A signature 56 74 - -
Mal1g1445 124 MobiDBLite consensus disorder prediction 104 124 - -
Mal1g1445 124 SUPERFAMILY Histone-fold 7 103 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1445 Mal-Chr1 18552603 18552977 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1445 7 120 CCAAT-HAP3 Transcription Factor Family AT1G09030 62.602 6.25e-52 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mal1g1445 CBFD_NFYB_HMF 5.5e-26 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1445 K08065 - gmx:100815151 172.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1445 1 18552603 18552977 Mal1g1445 1 18552603 18552977 ECH