Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1436 ATGGCACCAACAAGGAAATCTAGAAGTGTGAATAAGCGTTTTAAAAATACAAATGATCTTTCACCAGAGAAGGATGGAGTTGGCTCAAATAAAAACAAACACCGGAAGAAGAAGTTGTCTGATAAATTGGGATCTCAGTGGAGCAAGGGGGAACTAGAGCGATTCTATGAAGCATACAGAAAATATGGGAAAGATTGGAAGAAGGTGGCTGCCGCTGTACGGAATAGATCCATTGAAATGGTGGAAGCTCTTTACAATATGAATCGGGCATACCTATCTCTACCAGAGGGGACGGCTTCTGTTGTTGGCCTCATTGCAATGATGACAGATCATTATAATGTCCTGGAAGAGAGTGATAGTGAAAGGGAGAGCAATGATGCACCAGGATCTCGAAAACCTGTGAAACGAAAGCGTGAAAAACTTCAGCTTAATGTCTCAAAGGATCCTGTCCAGTCTCAGTCTGTAACTTCCAGTGATGGCTGCCTCTCTCTACTGAAGAAAAGACGCATTGATGGTCTCCAGCCTCGTGCTGTTGGAAAAAGGACACCGCGAGTCCCAGTTTACCACTCTCACAAGAAAGATGATAGGGAGAATTATGCTTCGCCCAACAAAAGAAGCTTGAAGTCCACTGTTGATGCTAATGATGACGAAGTTGAACATGTAGCTTTTGCATTAAGCAGGGCTTCACAAAGAGGAGGCTCTCCCCTAGTTTCTCAAACACCCAATAGGAGAGCAGAACAGAAATTCTCTCCTGTTCAGAGCCGGGAAAGAACGCACCAAATGTCGGAAACAGCTCGTGCCAAGTTTCACGATGCTTCTGTGGATGGAGAGTTTTTGGAAGGTAGTCTGGACAGCAGGGGAGCTGAAAATGGAGAATATGTTAGAGATACTAGTTCCTTGATGGATATGGAAGGAATGAGCACTGCTGAAGTTCTTAAGGGAGGAAAATTTTACAGAAAGAAAGAGAGAGTGGAAAATGCTGGAAATTTTCAGCTTGATGATGGAGGAGAAGCATGCAGCGGCACTGAAGAAGGACTTAGTTTTAATTCTTTGAAGGAAAAGAATATGGAGGTTACTAATGAAAAGCTTGAGCAATTCTCCCCAACAAGTCAGCGGAAAAGAAGCAAAAAACTCCTCTTTGGAGGAGATGAAATCCACGCCTTGGATGCTTTGCAAACTTTGGCCGATCTATCTCTAATGATGCCGACTTCTGAAGTAGAATCTGAGTCATGTGTCCAGTTGAAGGGAGAAAGAATGACTGTTGATAAAGATGATAAGTCTGCTTTACCTGGATCAACATCAACAAGCCATAAGAGAAATAAAGTTAAACTCCGTGCGGTCCCTGGAAGTGACACTTCAACGTCCAAAAAATCTAAACTCGGAAAGGATATAGCAAATGATATCAACGCTCTCTCTGAATCAAAAGAGCAGCTTCCATTTGCTGATAAAACATGGAAAAGAAAGCAAAAGTCCACGGTGTCAAAGGCTGTAGATGATGAGAAAAAACCACCGATTAAAGGAAAACACCTTGATCAGGTTTTTGCCTCACCGAAACAAATGAAGATGGTCAAACCTTCCGAGGTTTTCCTGCGTGGTGATCAGAAAGGTTCAGCAGTATCAACTTCTGAAATTCCACTTTTTAGTGAAGTTAGTTCACCAACTAAACAAAGAAGTAGACGCAAGATGATTTTTCAGAGACCATCAATGCGTAAGGAGAAGTCTTACGAGAATGTATTGAAAAATCAACCTAATAAGTACTCTACCCAAAAGGAAAAGCTTTCTAGCTGCTTGTCATCTTATATGGTTCGTAGATGGTTTACTTTTGAATGGTTTTATAGTGCACTTGATTATCCATGGTTTGCCAAAAGAGAATTTGTGGAGTACTTAAATCATGTTGGACTAGGGAATATCCCAAGGCTAACTCGTGTTGAGTGGAGTGTCATAAAAAGTTCCCTTGGCAAACCACGCAGGTTTTCTGAACACTTTTTACATGAAGAAAGACAAAAACTTGAACAGTATCGAGAATCAGTGAGGAAACACTATTCTGAGCTGCGGACTGGTATAAGAGATGGACTTCCAACAGATTTGGCAAGGCCATTATATGTTGGACAACGAGTAATTGCCATTCACCCCAAAACAAGAGAGATTCATGATGGTAGTGTGCTTACAGTTGACCATGACAAGTGCAGGATTCAGTTTGACCGTCCTGAGTTAGGAGTTGAATTCATCATGGACATTGATTGCATGCCTTTGAATCCATTAGATAATATGCCCGAAGCATTGAGGAGGCAGATTGGTGCCAGAAAAGCCTCTTTTATGACTATAGAACCACAGATTAATGGAAATTCAAGTTTTGGGGGATGTGAAACGCATGCTTCACCTGTGAAGGTGGATGCTAACCATGTCGCTTCCCAGGCCAATATTGATAACCTCTCTGCACAAGCTGCCTCTGCTCAACCGTGTAAAGTGATGCAACATCAATCTAAAGAAGCTGATATACATGCACTTTCTGAACTAAAGCATGCTTTAGATAAAAAGGAGACACTGTTAACAGAGCTTCGAAATGCAAATAATGGCATAATGGAAAACCAAAATGGCATAGAATGTTTAAAAGATTCCGAAGGTTTCAAGAAGCATTATGCCACGGTACTTGTAGAGCTAAAGGAAGCCAGTGGACAGGTTTCGGATACCATGCTTCAATTGAGGCAACGCAATACTTACACGGACACCTCTCTGCCACCATGGATGAAGCCCAAAGCAAACTTCGAAGTTCATGATGACCTTCCTAGTGTGTTGGATAGTTCTATGACACAAGAATCTAAGTCAACTGTCATTGAAATCATCAAAGAATCCAGGCTACGGGCAAATGCAATGCTGGATGCTGCATTTCAGGCATGGTCTCAAGCTACAAAGGAAGGTAAAGATGCTATTACGAGGATTGGGCAGGCATTGGATTCTATTGATTATCAGCAGTTGTCCTCCAAGCACAGGTTGCCTATGATAAGGTCTCAAGATCAAGTGAATGGCAGTGTTTATCATCATAATCAGTCGACTTGCAGAGCATCAGAGCCTTTAGTTAATGATGCATCTGGTCCAAAACTGAATAAAGATTCTGAAGAAGCTGATATTGAAATACCGTTTGAGCTCATCACTTCATGTGTTGCTACATTAACCATGATACAGAGTTGTACTGAACGACAATACCCTCCAGCAGATGTGGCTCGGATATTAGATTCTGCCGTTACCAGCCTGCAACCGTGCGATCCTCGAAACATTCCTATTTATAGAGAAATTCAAATGTGCATGGGAAGAATTAAGACCCAGATTTTAGCTCTCATCCCTACTTAA 3348 0.4179 MAPTRKSRSVNKRFKNTNDLSPEKDGVGSNKNKHRKKKLSDKLGSQWSKGELERFYEAYRKYGKDWKKVAAAVRNRSIEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLEESDSERESNDAPGSRKPVKRKREKLQLNVSKDPVQSQSVTSSDGCLSLLKKRRIDGLQPRAVGKRTPRVPVYHSHKKDDRENYASPNKRSLKSTVDANDDEVEHVAFALSRASQRGGSPLVSQTPNRRAEQKFSPVQSRERTHQMSETARAKFHDASVDGEFLEGSLDSRGAENGEYVRDTSSLMDMEGMSTAEVLKGGKFYRKKERVENAGNFQLDDGGEACSGTEEGLSFNSLKEKNMEVTNEKLEQFSPTSQRKRSKKLLFGGDEIHALDALQTLADLSLMMPTSEVESESCVQLKGERMTVDKDDKSALPGSTSTSHKRNKVKLRAVPGSDTSTSKKSKLGKDIANDINALSESKEQLPFADKTWKRKQKSTVSKAVDDEKKPPIKGKHLDQVFASPKQMKMVKPSEVFLRGDQKGSAVSTSEIPLFSEVSSPTKQRSRRKMIFQRPSMRKEKSYENVLKNQPNKYSTQKEKLSSCLSSYMVRRWFTFEWFYSALDYPWFAKREFVEYLNHVGLGNIPRLTRVEWSVIKSSLGKPRRFSEHFLHEERQKLEQYRESVRKHYSELRTGIRDGLPTDLARPLYVGQRVIAIHPKTREIHDGSVLTVDHDKCRIQFDRPELGVEFIMDIDCMPLNPLDNMPEALRRQIGARKASFMTIEPQINGNSSFGGCETHASPVKVDANHVASQANIDNLSAQAASAQPCKVMQHQSKEADIHALSELKHALDKKETLLTELRNANNGIMENQNGIECLKDSEGFKKHYATVLVELKEASGQVSDTMLQLRQRNTYTDTSLPPWMKPKANFEVHDDLPSVLDSSMTQESKSTVIEIIKESRLRANAMLDAAFQAWSQATKEGKDAITRIGQALDSIDYQQLSSKHRLPMIRSQDQVNGSVYHHNQSTCRASEPLVNDASGPKLNKDSEEADIEIPFELITSCVATLTMIQSCTERQYPPADVARILDSAVTSLQPCDPRNIPIYREIQMCMGRIKTQILALIPT* 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1436 1115 PANTHER PROTEIN ALWAYS EARLY 1-RELATED 1 1115 IPR028306 -
Mal1g1436 1115 SMART DIRP_2 611 712 IPR033471 -
Mal1g1436 1115 MobiDBLite consensus disorder prediction 116 144 - -
Mal1g1436 1115 MobiDBLite consensus disorder prediction 231 248 - -
Mal1g1436 1115 Pfam DIRP 610 711 IPR033471 -
Mal1g1436 1115 PANTHER LIN-9 1 1115 IPR010561 GO:0006351|GO:0017053
Mal1g1436 1115 MobiDBLite consensus disorder prediction 225 258 - -
Mal1g1436 1115 SUPERFAMILY Homeodomain-like 41 90 IPR009057 -
Mal1g1436 1115 MobiDBLite consensus disorder prediction 482 506 - -
Mal1g1436 1115 ProSiteProfiles SANT domain profile. 42 77 IPR017884 -
Mal1g1436 1115 Gene3D - 4 99 - -
Mal1g1436 1115 MobiDBLite consensus disorder prediction 418 460 - -
Mal1g1436 1115 Pfam Myb-like DNA-binding domain 45 82 IPR001005 -
Mal1g1436 1115 MobiDBLite consensus disorder prediction 173 213 - -
Mal1g1436 1115 MobiDBLite consensus disorder prediction 116 158 - -
Mal1g1436 1115 MobiDBLite consensus disorder prediction 188 202 - -
Mal1g1436 1115 Coils Coil 836 856 - -
Mal1g1436 1115 Coils Coil 663 683 - -
Mal1g1436 1115 CDD SANT 47 81 IPR001005 -
Mal1g1436 1115 MobiDBLite consensus disorder prediction 1 44 - -
Mal1g1436 1115 SMART sant 43 91 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1436 Mal-Chr1 18479275 18488676 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal1g1436 DIRP 1.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1436 - - gmx:100816217 1623.6