Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1407 ATGGAAGTTAACACAACTACCACAGTACCTGCAGGGCCACCAACTGTTTCTACAAAGAACCATACTTTCATACACCATTACCATCACTTACATTCAGAAAAACATTACCATAGTCATATCCCCTTCAAAACCATTCTCATTATTATCACAATGGTTGCCTTAATTATGCTCCTATTTACCATTTTTATGGTTGTATGCTTGATCCGTCGCCAAAAGTCTTCCTGCAAAAATGGGGTTTGCAAAGATGATTGTGAGACTAGAGTGCTTCATGACACAAGCAGAAGACACATCGCTCCAACAATCTTGTCCTTTGATTCTAGCCCAGATGTTAAAAGTGGATGTCTTTATGGGGGAAGTTTGAGCAGGACACCACCAACACCTAAATTTAAAGGAGTGCAAGTTTTCACTTATAGGGAGCTAGAAGCTTCTACTGATGGATTCAGTAAAGCAAATGTGATAGGTAATGGAGGGGTAAATGGTTTGATGTATAAAGGAGTCTTAAGTGATGGAACTTTGGCAGCAATTAAGTTGCTTCACAGTGAGGGTAAGCAAGCAGAGCGTGGCTTCAGAATAGAGGTCGATCTCCTAAGCCAATTGCGCTCTCCTTATTTGGTGGAGTTACTTGGCTATTGTGCTGACCAACACCACAGGTTGTTGATTTTTGAATACATGCCCAATGGTACACTCCAACACCATCTTCATTCCACCAAGGATCAAACTCAACCATTGGATTGGTGGGCCAGGATGAGGATAGCCCTTGATTGTGCCAGGGCCTTGGAGTTCCTACATGAACATGCTGTCTCACCCGTGATACACAGAGACTTCAAGAGTTATAATGTTTTACTGGATCAGAATTTCCGTGCAAAGGTGTCAGATTTTGGATTGGCTAAGATGGGATCAGGGAAGAAAAATGGCCAGGTTTCTACCCGTGTGTTGGGGACCACTGGATATTTGGCACCAGAGTACGCCTCCACGGGTAAGCTTACAACAAAGTCAGATGTTTACAGCTATGGTGTAGTTCTTCTCGAATTGCTAACAGGACGTGTACCAGTTGATATTAAGCGGCCCACCGGAGAACATGTCCTTGTCTCTTGGGCTCTTCCAAGGTTGACAAACAGAGAAAAAGTTGTGGAAATGGTTGACCCAATTCTACACGGGCAGTACTCAAAGAAGGCTTTAGTTCAGGTAGCTGCTATCGCAGCAATGTGCATACAGCCAGAAGCTGATTACAGGCCGCTCATGACAGATGTTGTACAGTCATTGATACCACTTGTGAGGGCCCATTCTCTTTCCAGTTCCCTAAGATTTCAGAAACAAATGCCAAGTTATTAG 1332 0.4347 MEVNTTTTVPAGPPTVSTKNHTFIHHYHHLHSEKHYHSHIPFKTILIIITMVALIMLLFTIFMVVCLIRRQKSSCKNGVCKDDCETRVLHDTSRRHIAPTILSFDSSPDVKSGCLYGGSLSRTPPTPKFKGVQVFTYRELEASTDGFSKANVIGNGGVNGLMYKGVLSDGTLAAIKLLHSEGKQAERGFRIEVDLLSQLRSPYLVELLGYCADQHHRLLIFEYMPNGTLQHHLHSTKDQTQPLDWWARMRIALDCARALEFLHEHAVSPVIHRDFKSYNVLLDQNFRAKVSDFGLAKMGSGKKNGQVSTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPTGEHVLVSWALPRLTNREKVVEMVDPILHGQYSKKALVQVAAIAAMCIQPEADYRPLMTDVVQSLIPLVRAHSLSSSLRFQKQMPSY* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1407 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Mal1g1407 443 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 1 435 - -
Mal1g1407 443 PANTHER OS01G0750732 PROTEIN 1 435 - -
Mal1g1407 443 Gene3D Transferase(Phosphotransferase) domain 1 224 438 - -
Mal1g1407 443 SUPERFAMILY Protein kinase-like (PK-like) 124 421 IPR011009 -
Mal1g1407 443 Gene3D Phosphorylase Kinase; domain 1 121 223 - -
Mal1g1407 443 Pfam Protein tyrosine and serine/threonine kinase 153 421 IPR001245 GO:0004672|GO:0006468
Mal1g1407 443 CDD STKc_IRAK 153 424 - -
Mal1g1407 443 ProSiteProfiles Protein kinase domain profile. 147 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1407 Mal-Chr1 18203924 18206996 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1407 43 434 Receptor kinase-like Gene Family AT3G58690 56.423 2.29e-147 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Mal1g1407 PK_Tyr_Ser-Thr 1.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1407 - - mtr:MTR_1g082580 816.994