Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1381 ATGGGTTGTGTAATTAGCCGAGAAGTGGAATCGGGTATTGTGTCTGAGGTGAAAGAGGAGAGGAATTTGAGAGCTGAGTCGAGCAGGAAGGTTGAAGAAGTGTCCACGAGTAGAGCTGAGGAGAGTGCGGTGGAGGTTCAGAATGGTGAGAAGGTGAAGAAGGTTAAGGAGAAAGAAGAGAAGAGTGATGGTGATGGGGTTCAGCGGCCGAAGGGTGAAAGAAGGAGATCAAAGCCAAACCCGAGGTTGAGTAACCCGCCAAAGAATTTGCAAGGGGAGCAAGTAGCAGCTGGATGGCCATCTTGGCTTACGGCAGTTTGTGGGGAAGCCCTTAATGGGTGGATTCCGCGAAAGGCCGATACATTTGAGAAAATAGATAAGATCGGTCAAGGAACATATAGTAATGTGTACAAAGCTAAAGATTTAATAACGGGTAAGATTGTTGCATTGAAGAAGGTTCGATTTGACAATTTGGAACCCGAGAGCGTAAAATTCATGGCTAGAGAGATCCTTATACTGAGAAGATTGGATCATCCCAATGTTATAAAGTTAGAAGGTTTAGTTACATCTAGAATGTCCTGGAGTTTGTATCTGGTGTTTGAGTACATGGTACACGATTTAGCCGGACTTGCTGCAAGTCCTGATATCAAGTTCACAGAGCCTCAGGTAAAATGTTACATGCAGCAACTGCTATCAGGACTTGAGCACTGTCATAATCGACATGTACTTCACCGCGATATTAAAGGATCAAATCTTCTGATTGACAATGAAGGAATACTCAAAATTGCCGACTTTGGACTTGCATCTTTCTTTGATCCAACCCGCAGACATCCTATGACTAATCGTGTGGTTACCCTTTGGTACCGGCCTCCTGAGTTGCTTCTCGGTGCCACAGAGTATGGTGTGGGTGTGGACCTTTGGAGTGCCGGTTGCATTTTAGGAGAGTTATTGTACGGGAAACCAATTATGCCTGGTCGTACAGAGGTGGAACAACTGCACAAGATATACAAGCTTTGTGGTTCACCTTCTGATGAGTATTGGAAGAAGTCAAAGTTGCCTAATGCTACCTTGTTCAAACCTCGAGAGCCATATAAAAGATGCATAAGAGATGTATTTAAAGAATTTCCACCTTCTGCTCTTCCCCTTGTCGATACTCTTCTTGCGATTGATCCAGTAGAACGGAAGAGTGCCTCAGACGCTCTAAGAAGTGAGTTCTTTAACACAGAACCTTATGCTTGCGATCCTTCTAGTCTTCCGAAGTATCCCCCAACCAAGGAAATGGATGTTAAACGGCGTGACGATGAAGCAAGAAGATCAAGAGCTGCAGCCAAAGCTCGAGCTGATGGAGGAAAGAAGCATCATCGGACACGTGACCGGGCTGTAAAAGCTGCTCCTGCTCCTGAAGCCAATGCTGAGCTTCAATACAATATTGATAGAAGGCGTCTAATCACTCATGCTAATGCTAAGAGCAAGAGTGAAAAGTTTCCTCCGCCGCACGAAGATGGACAACTTGGATTTCCATTGGGAGCTTCAAATCATATTGATCCAGATATAGTTCCTCATGATGTCTCTTTGGATTCAATGTCATATACCTTTTCAAAGGAACCATTTCAAGCTTATTCAGGTCCAATAGGTAATACTACCAGCAATGGTTTCACAAAGCGGAAGAAAAACACTGCGAATGATGCATTGGATTTATCAAAACCATATAAAGGAACCCACAAGGATAAGGGTAAAGGAAAGAAAATCATAGCTTAA 1758 0.438 MGCVISREVESGIVSEVKEERNLRAESSRKVEEVSTSRAEESAVEVQNGEKVKKVKEKEEKSDGDGVQRPKGERRRSKPNPRLSNPPKNLQGEQVAAGWPSWLTAVCGEALNGWIPRKADTFEKIDKIGQGTYSNVYKAKDLITGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSWSLYLVFEYMVHDLAGLAASPDIKFTEPQVKCYMQQLLSGLEHCHNRHVLHRDIKGSNLLIDNEGILKIADFGLASFFDPTRRHPMTNRVVTLWYRPPELLLGATEYGVGVDLWSAGCILGELLYGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNATLFKPREPYKRCIRDVFKEFPPSALPLVDTLLAIDPVERKSASDALRSEFFNTEPYACDPSSLPKYPPTKEMDVKRRDDEARRSRAAAKARADGGKKHHRTRDRAVKAAPAPEANAELQYNIDRRRLITHANAKSKSEKFPPPHEDGQLGFPLGASNHIDPDIVPHDVSLDSMSYTFSKEPFQAYSGPIGNTTSNGFTKRKKNTANDALDLSKPYKGTHKDKGKGKKIIA* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1381 585 MobiDBLite consensus disorder prediction 20 94 - -
Mal1g1381 585 PANTHER OS01G0367700 PROTEIN 46 560 - -
Mal1g1381 585 Gene3D Phosphorylase Kinase; domain 1 109 204 - -
Mal1g1381 585 Gene3D Transferase(Phosphotransferase) domain 1 205 446 - -
Mal1g1381 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Mal1g1381 585 ProSitePatterns Protein kinases ATP-binding region signature. 128 151 IPR017441 GO:0005524
Mal1g1381 585 MobiDBLite consensus disorder prediction 543 557 - -
Mal1g1381 585 MobiDBLite consensus disorder prediction 20 80 - -
Mal1g1381 585 MobiDBLite consensus disorder prediction 424 446 - -
Mal1g1381 585 MobiDBLite consensus disorder prediction 558 573 - -
Mal1g1381 585 Pfam Protein kinase domain 122 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1381 585 PANTHER CELL DIVISION PROTEIN KINASE 46 560 - -
Mal1g1381 585 CDD STKc_CDK9_like 122 406 - -
Mal1g1381 585 SUPERFAMILY Protein kinase-like (PK-like) 116 412 IPR011009 -
Mal1g1381 585 SMART serkin_6 122 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1381 585 MobiDBLite consensus disorder prediction 543 585 - -
Mal1g1381 585 ProSiteProfiles Protein kinase domain profile. 122 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1381 585 MobiDBLite consensus disorder prediction 414 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1381 Mal-Chr1 17783661 17790652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1381 114 444 Core Cell Cycle Gene Families AT5G10270 52.738 1.72e-121 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mal1g1381 Pkinase 2.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1381 K08819 - gmx:100817289 965.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1381 1 17783661 17790652 Mal3g4982 3 129814031 129818618 ECH
Mal1g1381 1 17783661 17790652 Mal1g1381 1 17783661 17790652 ECH
Mal3g4982 3 129814031 129818618 Mal1g1381 1 17783661 17790652 PCT