Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1376 ATGAGTGAAAGAGGGAAGAAAGAAAGAATGAAGAACATCTTCAAGAAGCTTCATATAGGTAGTAGTAGTAACAACCACGATCCTCATCGATCCAATGAAACTCCGCCACGTGTACCATCGCCCACCGAAGACGTTCAGAATTCCGGCGCCGGCGCTTCTACAGTCACTCCACCTTCGTCTTCGCCGGCAGCCGTTACTCCTTCCTCCGTTGGTGGTGTGTCTGCGGTGGTTAATCGGCAAGATTTTTTCTCGTCGGAGGAGGAGTTTCAGGTGCAGTTAGCCCTAGCGATCAGTGCTTCCAATTCGGAGTTTCGTTGTGATGATCCTGAGAAGGATCAGATCCATGCGGCGACGCTGCTTAGTTTGGGAGGGAATCGGGTTGATTCGTCCAGGAATAAGGATGATGCGGCGGAGGTGCTTTCGAGGCAGTATTGGGATTACAATGTGCTTGACTATGAGGAGAAAGTAGTAGATGGTTTTTATGATGTATATGGGCTCTACAATGATCCGGCAATGCAAGGAAAGATGCCATCACTAGCAGATCTTGAAACAAACCCAGGTGGTTCTAACTTTGAAGTGGTCTTAGTTAATCGAACAATTGACCCTGCCCTCGAAGAGCTGGTGCAAATTGCACATTGTATATCATTGGACTGCCCTGTTACTGAGATTGGTATTTTGGTACAAAGGCTTGCCGAACTTGTTACTAGCCATATGGGTGGCCCTGTAAAGGATGCTAATATTATATTAGCAAGATGGACAGAAAGAAGTACAGAGTTAAGGACATCTCTTCAGACAAATGTATTACCTCTTGGGTCCTTAGATATTGGGCTCTCTAGGCATCGCGCTTTACTTTTCAAGATATTAGCAGACAACATTAAGATGCCTTGTAGACTGGTTAAAGGTAGTCATTACACTGGTGTTGAGGATGACGCTGTCAACATTATAAAATTGGAAGATGAAAGGGAGTTTTTAGTTGATCTCATGGCTGCTCCCGGAACACTCATCCCAGCTGATATTTTAAATGCAAAGGATAATGCCTTTAAGTCTTACAACCCCAAGATTGTGCCGAATTTACCTTCCACTGAGGAAACTGAGCTTTCTTACTCAAGCCCTATACCACCATCTAATGGTGAAGGTAGTAGTCAGACTTCTGTGATAAGAGCTCTTACGCCGCCTTGGAATGGAAAATCAAATACTGAGAAATCAGAGTATATGCCTTCAAACTTTGGTTTGAGCAGAGACACTGGTGTTGGTCCTTCTAAAATTCCTAATAGAGGGAATCCTAACCATCGGGAAAATTTGCCACCCTCGTATGTTAATTCTCTGTACAAAGGTACTCTTGGAATGAATGCAGTTGGTGATGGCACAAGAGTCAATGTTGTGCCATATGCCCAAAACAACCCCAACGACCCTCAGAACCTTTTTGCAGATTTGAACCCATTCTTGATAAAAGGGACCGGGAAGCCTTCTGTGCATAACAAACCTGTGGAAAATAAATCTTCTGAGCAAGGTGCAAAAAACAATATTGTTTCTAGTCGACCCATGCCACCACTGATGTGGAAGAATCGACATGCCTTCAACGAAGTCCCCAGGAAAACTAACCATAACCCTAATGAATATAATCCTCCTCTATTTGTTTCCAATTCCAATTCATCATACAATTCAAATATAAATAATCATATTAGTTCACAAACTTCGGCACAAATTACTGGTTCAGTCTCGCCAGCTGGTGTAGGTGAACCAAATCGGATTGAGGGTCTCAATGCTAATTTTAGAAGGGGTGATTTGGGAAGTTCTTATCATGTCATGGCAGAGGCAGTTAATGAACCCGAAAACAATGAACTCAGACATCATGACAGGAGGAAGTGCATACATGACAGATTCATGGGAAGCAATTTTCAATTAAATGATTCAGATAGTCCTAGCTCTTCAATTGATTCCACTACAAATAGGGTCGATCAAATATTGGACGATGCAGATGTTGGTGAATGTGAGATTCCATGGGAGGATCTGGTAATTGGTGAAAGAATTGGTCTAGGTTCATATGGTGAGGTATATCGCGCGGACTGGAATGGCACAGAGGTTGCCGTGAAGAAATTTTTGGATCAGGATTTTTCAGGTGCTGCCTTGTCTGAATTCAAAAGAGAAGTACGGATAATGCGTAGGCTGCGTCATCCAAATGTTGTTCTTTTTATGGGTGCTGTCACCCGGCCTCCCAATCTCTCAATCATTTCAGAGTTTCTCCCTAGAGGAAGCTTGTACCAAATTCTTCATCGCCCTAATTGTCAGATCGACGAGAAACGAAGAATAAAAATGGCTCTGGATGTGGCTAGGGGTATGAATTGCTTGCACGCCAGCACACCTACAATTGTTCACCGAGATCTGAAGTCCCCAAATCTTTTGGTTGATAAGAACTGGAACGTTAAGGTATGCGATTTTGGGTTGTCAAGGTTGAAGCATAACACATTTTTATCATCCAAATCAACTGCTGGAACGCCGGAATGGATGGCTCCTGAAGTTCTCCGCAATGAGCCTTCAAATGAGAAGTGTGATGTTTATAGTTTTGGTGTTATCCTATGGGAGCTTGCCACTTTAAGGTTGCCATGGAGTGGGATGAATCCTATGCAAGTTGTTGGTGCCGTAGGTTTCCAAAACCGTCGCCTTGAAATTCCCAAGGAGCTTGATCCTTTAGTTGCAAGAATAATCTGGGAATGTTGGCAACAGGACCCAAATTTGCGCCCCTCGTTTGCACAGCTCACGGTGGCTCTGAAGCCCTTGCAGCGTCTGGTTATCCCATCTCATCAAGATCAGGTAGCTTCACCTCTGCCTCAGGAGATTTCTGTAAATTCTACCCCATGA 2859 0.4383 MSERGKKERMKNIFKKLHIGSSSNNHDPHRSNETPPRVPSPTEDVQNSGAGASTVTPPSSSPAAVTPSSVGGVSAVVNRQDFFSSEEEFQVQLALAISASNSEFRCDDPEKDQIHAATLLSLGGNRVDSSRNKDDAAEVLSRQYWDYNVLDYEEKVVDGFYDVYGLYNDPAMQGKMPSLADLETNPGGSNFEVVLVNRTIDPALEELVQIAHCISLDCPVTEIGILVQRLAELVTSHMGGPVKDANIILARWTERSTELRTSLQTNVLPLGSLDIGLSRHRALLFKILADNIKMPCRLVKGSHYTGVEDDAVNIIKLEDEREFLVDLMAAPGTLIPADILNAKDNAFKSYNPKIVPNLPSTEETELSYSSPIPPSNGEGSSQTSVIRALTPPWNGKSNTEKSEYMPSNFGLSRDTGVGPSKIPNRGNPNHRENLPPSYVNSLYKGTLGMNAVGDGTRVNVVPYAQNNPNDPQNLFADLNPFLIKGTGKPSVHNKPVENKSSEQGAKNNIVSSRPMPPLMWKNRHAFNEVPRKTNHNPNEYNPPLFVSNSNSSYNSNINNHISSQTSAQITGSVSPAGVGEPNRIEGLNANFRRGDLGSSYHVMAEAVNEPENNELRHHDRRKCIHDRFMGSNFQLNDSDSPSSSIDSTTNRVDQILDDADVGECEIPWEDLVIGERIGLGSYGEVYRADWNGTEVAVKKFLDQDFSGAALSEFKREVRIMRRLRHPNVVLFMGAVTRPPNLSIISEFLPRGSLYQILHRPNCQIDEKRRIKMALDVARGMNCLHASTPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWSGMNPMQVVGAVGFQNRRLEIPKELDPLVARIIWECWQQDPNLRPSFAQLTVALKPLQRLVIPSHQDQVASPLPQEISVNSTP* 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1376 952 PANTHER SERINE-THREONINE PROTEIN KINASE 74 944 - -
Mal1g1376 952 MobiDBLite consensus disorder prediction 486 518 - -
Mal1g1376 952 ProSiteProfiles Protein kinase domain profile. 671 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1376 952 Gene3D Phosphorylase Kinase; domain 1 664 748 - -
Mal1g1376 952 Pfam Protein tyrosine and serine/threonine kinase 672 921 IPR001245 GO:0004672|GO:0006468
Mal1g1376 952 MobiDBLite consensus disorder prediction 358 436 - -
Mal1g1376 952 Pfam Ethylene-responsive protein kinase Le-CTR1 137 335 - -
Mal1g1376 952 PRINTS Tyrosine kinase catalytic domain signature 831 841 IPR001245 GO:0004672|GO:0006468
Mal1g1376 952 PRINTS Tyrosine kinase catalytic domain signature 850 872 IPR001245 GO:0004672|GO:0006468
Mal1g1376 952 PRINTS Tyrosine kinase catalytic domain signature 745 758 IPR001245 GO:0004672|GO:0006468
Mal1g1376 952 PRINTS Tyrosine kinase catalytic domain signature 894 916 IPR001245 GO:0004672|GO:0006468
Mal1g1376 952 PRINTS Tyrosine kinase catalytic domain signature 784 802 IPR001245 GO:0004672|GO:0006468
Mal1g1376 952 MobiDBLite consensus disorder prediction 493 510 - -
Mal1g1376 952 Gene3D Transferase(Phosphotransferase) domain 1 750 932 - -
Mal1g1376 952 MobiDBLite consensus disorder prediction 358 409 - -
Mal1g1376 952 SUPERFAMILY Protein kinase-like (PK-like) 662 942 IPR011009 -
Mal1g1376 952 ProSitePatterns Protein kinases ATP-binding region signature. 677 699 IPR017441 GO:0005524
Mal1g1376 952 ProSitePatterns Serine/Threonine protein kinases active-site signature. 790 802 IPR008271 GO:0004672|GO:0006468
Mal1g1376 952 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 74 944 - -
Mal1g1376 952 MobiDBLite consensus disorder prediction 36 69 - -
Mal1g1376 952 MobiDBLite consensus disorder prediction 1 69 - -
Mal1g1376 952 CDD STKc_MAP3K-like 677 920 - -
Mal1g1376 952 SMART serkin_6 671 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1376 Mal-Chr1 17720049 17730326 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1376 10 907 MAP Kinase Kinase Kinase AT1G08720 55.484 0.0 922
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Mal1g1376 PK_Tyr_Ser-Thr 3.3e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1376 - - aprc:113870732 1532.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1376 1 17720049 17730326 Mal1g1376 1 17720049 17730326 ECH
Mal1g1376 1 17720049 17730326 Mal3g3968 3 117968110 117969756 PCT