Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1360 ATGGCATTCTTTCAAAACGGCGTCGTTTTTCCCAAAGAAGAACACGTCGACATCGAAGGTGAAGACGACGACGACGTCGTCGAAGAAGAAGACAACTATTTCGTCGAACCAAACGACGAAAACAACTCTACCGAACAATTTCCGTCAACTTTCGCCGCCACCGTCACCGCCGCAATTCCCACCACCGTCATCTTAGCTTTACCAAACGCCGCCGCAACAACAACCGTCGTCGACGACTCACCCGAACCAAAAGGGGAGCAAATGGAAGAGAAGAACAGCGATTCACGTAAGCTTTTTCAGCGTCTCTGGACTGAAGAAGACGAGATTACGATCTTGCAAGGTTTTCTCGATTACAACGCGAATCGTGGATCTTCTTATCACAATGACACTGGATCGTTCTACGATCAAATTAAGTCGAAGATTCAACTCGATTTCACCAAGAGCCAGCTTGTTGATAAGCTTCGAAGGTTGAAGAAAAAGTATCGTACCGTTCTTCAGAAATTCGATTCTGGTAAGGATTTTGTCTTCAAAACCGCTCATGATCAAGCTACGTTTGAAATTTCACACAAAATCTGGAACAATAACAACAATTCAACTCCAATTGGCGTTCCTGTTGAAGAAGATGATGAAATCAGCCCAAACCCTAACCCTAACCCTAATTCAGCTCATACTACCCCGGTGAAGAATGATCCGATTACTGAGAAGAAAGCTGCGCAATCGCGTAAGCGTTCGCGAGCAGCTGAGGAGAAGCGTGGGGTGAATGATTCTAAAGATAATCATCATAATAATTCTGGTAATAACAATAGTAGCAATGTTGATGAAAATGCTGATAAAAGTAACGGTAATCATATGCATAATGTACCTGGATTGATTGAAGAAGCTGTGAAGAGTTGTTTGACTCCGGTGTTGAAGGAATTGTCGAATACTACCATGGGGAGTCCTTTTGGTTTTGGGGGAAGAGGGTTTGGTGTTGGAGGTTTTTCATTGAATGCTATGCCATTTGGGTTTTTGAATTTGGGGCAAGGGGAAAAAGTGGTGGATGAGAAGTGGAGGAAGCAACAGATACTGGAGCTGGAAGTGTATTCGAAGCGGTTGGAGCTTGTGCAGGATGAGATCAAGGCTGCTCTGGAGGAGTTGCGATCATCCGCCGGAGCTGGAGGTAGATGA 1167 0.4473 MAFFQNGVVFPKEEHVDIEGEDDDDVVEEEDNYFVEPNDENNSTEQFPSTFAATVTAAIPTTVILALPNAAATTTVVDDSPEPKGEQMEEKNSDSRKLFQRLWTEEDEITILQGFLDYNANRGSSYHNDTGSFYDQIKSKIQLDFTKSQLVDKLRRLKKKYRTVLQKFDSGKDFVFKTAHDQATFEISHKIWNNNNNSTPIGVPVEEDDEISPNPNPNPNSAHTTPVKNDPITEKKAAQSRKRSRAAEEKRGVNDSKDNHHNNSGNNNSSNVDENADKSNGNHMHNVPGLIEEAVKSCLTPVLKELSNTTMGSPFGFGGRGFGVGGFSLNAMPFGFLNLGQGEKVVDEKWRKQQILELEVYSKRLELVQDEIKAALEELRSSAGAGGR* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1360 388 MobiDBLite consensus disorder prediction 213 228 - -
Mal1g1360 388 MobiDBLite consensus disorder prediction 234 258 - -
Mal1g1360 388 PANTHER BNAANNG10740D PROTEIN-RELATED 1 382 IPR007592 GO:0006355
Mal1g1360 388 PANTHER BNAANNG10740D PROTEIN 1 382 - -
Mal1g1360 388 MobiDBLite consensus disorder prediction 192 286 - -
Mal1g1360 388 MobiDBLite consensus disorder prediction 259 277 - -
Mal1g1360 388 Coils Coil 147 167 - -
Mal1g1360 388 Coils Coil 358 378 - -
Mal1g1360 388 MobiDBLite consensus disorder prediction 74 93 - -
Mal1g1360 388 Pfam Protein of unknown function, DUF573 99 193 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1360 Mal-Chr1 17562847 17564013 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1360 19 386 GeBP Transcription Factor Family AT5G28040 42.647 1.09e-74 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Mal1g1360 DUF573 1.9e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1360 - - cam:101492301 424.091