Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1356 ATGGCAGACAAGGCGGTTACCATCCGAACCAGGAAGTTCATGACTAACAGGCTTCTTTCAAGGAAGCAATTTGTCATTGATGTTCTTCACCCAGGAAGGGCAAATGTTTCCAAGGCTGAGTTAAAGGAGAAGTTGGCTAGGATTTATGATGTGAAGGACCCAAACACAGTATTTGTGTTCAAGTTCAGAACTCATTTTGGAGGTGGCAAGAGTACTGGTTTTGGTTTGATCTATGATTCTGTTGACAATGCAAAGAAATATGAACCAAAATACCGACTTGTTAGGAACGGACTTGATACTAAGGTTGAAAAGTCAAGGAAGCAAATGAAGGAAAGAAAGAATAGGTCAAAGAAGATTCGTGGAGTAAAGAAGACCAAGGCTGGCGATGCTGCCAAGGGTGGAAAGAAGAAATAA 414 0.413 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFVFKFRTHFGGGKSTGFGLIYDSVDNAKKYEPKYRLVRNGLDTKVEKSRKQMKERKNRSKKIRGVKKTKAGDAAKGGKKK* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1356 137 ProSitePatterns Ribosomal protein S24e signature. 66 88 IPR018098 -
Mal1g1356 137 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 6 108 IPR012678 GO:0003735|GO:0005840|GO:0006412
Mal1g1356 137 PANTHER 40S RIBOSOMAL PROTEIN S24 1 137 - -
Mal1g1356 137 Hamap 30S ribosomal protein S24e [rps24e]. 4 106 IPR001976 GO:0003735|GO:0005840|GO:0006412
Mal1g1356 137 Gene3D - 1 132 - -
Mal1g1356 137 Pfam Ribosomal protein S24e 25 103 IPR001976 GO:0003735|GO:0005840|GO:0006412
Mal1g1356 137 MobiDBLite consensus disorder prediction 98 137 - -
Mal1g1356 137 PANTHER 40S RIBOSOMAL PROTEIN S24 1 137 IPR001976 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1356 Mal-Chr1 17548413 17550293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1356 1 132 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 85.606 7.55e-84 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1356 K02974 - thj:104808542 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1356 1 17548413 17550293 Mal1g1356 1 17548413 17550293 ECH
Mal3g4997 3 130001112 130003870 Mal1g1356 1 17548413 17550293 PCT