Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1348 ATGTATGATGGAGTCCCTGACCAATTTCACCAATTCATAACTCCTAGAACTTCTTCATCATCACTACCTCTTCACTTACCTTTCCCTCTTTCAACACCAAATAACACTTTTCCATCTTTTGATCCTTATAATCAACAAAACCACCCTTCTCAACATCATCAATTACCACTCCAAGTTCAACCCAATCTCTTGCACTCTTTACACCCTCACAAAGATGATGAAGAAAAGGAACCTTCAATGAACAACTTCGAAATCCAAAGAGATCAAAGACAAATACTACCTCAACTCATTGATCCTTGGACTAACGATGAAGTACTTGCACTTTTGAAGATCAGATCCAGCATGGAGAGTTGGTTCCCAGATTTCACTTGGGAACATGTCTCAAGGAAGTTAGCAGAGGTTGGTTATAAACGTAGTGCTGAAAAATGCAAGGAGAAATTTGAAGAAGAAAGTAGATTTTTCAACAGCATTAGTAATAATCATAATCAAAATAATTTTGGTAAGAATTTTCGGTTTGTTACTGAACTTGAAGAGCTTTATCAAGGTGGTGGTGAGAATAATCATAATAATAATCAAGTTGAGACTGAAAAGCCAAACGAGGTACAAGACAAAATGGATCATCATGAAGAGGATTCAAGAAACGACGATGTTTTGGTGTCAAAGAAAAACCAAGAAGAGGTGTTAGAGAAAGGTGCTACAAATGATGAGAAGAAGAGGAAAAGAGTTGATGATGGATTTGAAGTGTTTAAGGGTTTTTGTGAGAGTGTGGTGAAGAGAATGATGGATCAACAAGAAGAAATGCATAACAAGCTTATTGAAGATATGATTAAAAGAGATGAAGAGAAGTTTAGTAGAGAAGAAGCTTGGAAGAAACAAGAGATGGAGAAAATGAACAAAGAGCTTGAGTTGATGGCACAAGAACAAGCTATTGCTGGTGATAGACAAGCTCATATTATTCAATTCTTGAACAAATTCTCAACAAGTACAAATTCTTCTTCTACTTCCCTAGCTTTAATTTCAGCTTCAATTCAAGAAAGCTTTGGAATTGGAAAAGATGGCAAATCTAAGGTAACACATTCTTCAATATTGCACTCATCACAAAACCCTAATCATGAAATTCATGATAAAACTCTTCAACTTCAACCAACACCTGAAAACCCTAGCTCAACCTTTCCTTCTTCTTCTACTACTTTGGTGGCTCCGCCTCGCCAGAACAACGCTATTTCTTCATATAGCGTTATATCTGGCGGGGAGAGAGAGGATATTGGTAGAAGATGGCCAAAAGATGAAGTGTTGGCATTGATAAACTTGAGGTGCAATAACAACAATGAAGAAAAGGAAGGAAACACCAACAAAGCTCCACTTTGGGAGAGAATTTCACAAGGGATGTTGGAGTTAGGATACAAGAGAAGTGCAAAGAGGTGCAAAGAGAAATGGGAGAATATAAACAAGTACTTCAGAAAAACTAAGGATGCTAATAGGAAAAGGTCACTTGATTCAAGAACTTGTCCTTACTTTCATCTATTGAGCAATCTTTATAATCAAGGTAAACTTGTTATGCAATCTGATCAAAAGCAAGAAAGCAATAACATGAATGTGGCAGAAGAAAATGTAGCTCAAGAGAAAGCAACTCAAGATGAAAACCAAGGTGGTGGTGCAGGTGAGTCTTCTCAAGTGGGGCCTACAAGCTGGTAA 1695 0.3723 MYDGVPDQFHQFITPRTSSSSLPLHLPFPLSTPNNTFPSFDPYNQQNHPSQHHQLPLQVQPNLLHSLHPHKDDEEKEPSMNNFEIQRDQRQILPQLIDPWTNDEVLALLKIRSSMESWFPDFTWEHVSRKLAEVGYKRSAEKCKEKFEEESRFFNSISNNHNQNNFGKNFRFVTELEELYQGGGENNHNNNQVETEKPNEVQDKMDHHEEDSRNDDVLVSKKNQEEVLEKGATNDEKKRKRVDDGFEVFKGFCESVVKRMMDQQEEMHNKLIEDMIKRDEEKFSREEAWKKQEMEKMNKELELMAQEQAIAGDRQAHIIQFLNKFSTSTNSSSTSLALISASIQESFGIGKDGKSKVTHSSILHSSQNPNHEIHDKTLQLQPTPENPSSTFPSSSTTLVAPPRQNNAISSYSVISGGEREDIGRRWPKDEVLALINLRCNNNNEEKEGNTNKAPLWERISQGMLELGYKRSAKRCKEKWENINKYFRKTKDANRKRSLDSRTCPYFHLLSNLYNQGKLVMQSDQKQESNNMNVAEENVAQEKATQDENQGGGAGESSQVGPTSW* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1348 564 Coils Coil 524 544 - -
Mal1g1348 564 Coils Coil 291 311 - -
Mal1g1348 564 CDD GT1 424 490 - -
Mal1g1348 564 PANTHER TRIHELIX TRANSCRIPTION FACTOR GTL2 17 560 - -
Mal1g1348 564 MobiDBLite consensus disorder prediction 181 236 - -
Mal1g1348 564 ProSiteProfiles Myb-like domain profile. 425 483 IPR001005 -
Mal1g1348 564 Gene3D - 426 488 - -
Mal1g1348 564 Gene3D - 100 155 - -
Mal1g1348 564 SMART sant 422 485 IPR001005 -
Mal1g1348 564 SMART sant 96 153 IPR001005 -
Mal1g1348 564 Pfam Myb/SANT-like DNA-binding domain 98 179 IPR044822 -
Mal1g1348 564 Pfam Myb/SANT-like DNA-binding domain 424 510 IPR044822 -
Mal1g1348 564 MobiDBLite consensus disorder prediction 350 402 - -
Mal1g1348 564 ProSiteProfiles Myb-like domain profile. 99 151 IPR001005 -
Mal1g1348 564 MobiDBLite consensus disorder prediction 359 402 - -
Mal1g1348 564 MobiDBLite consensus disorder prediction 522 564 - -
Mal1g1348 564 MobiDBLite consensus disorder prediction 197 236 - -
Mal1g1348 564 PANTHER - 17 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1348 Mal-Chr1 17455081 17457253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1348 1 515 Trihelix Transcription Factor Family AT5G28300 38.935 6.58e-103 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mal1g1348 Myb_DNA-bind_4 1.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1348 - - gmx:100804367 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1348 1 17455081 17457253 Mal1g1348 1 17455081 17457253 ECH
Mal3g5007 3 130117081 130118933 Mal1g1348 1 17455081 17457253 PCT