Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1346 ATGGAGCAGTATGAAGTACTTGAGCAAATTGGAAAAGGTGCTTTTGGTTCAGCACTTCTTGTAAGACATAAACATGAGAAGAAAAAATATGTGTTGAAGAAGATTAGACTTGCCCGCCAAACTGAGCGGTCTCGTAGATCTGCTCACCAGGAGATGGAGCTTATCTCTAAACTACGAAACCCATTTATTGTGGAGTATAAAGATTCATGGGTAGAAAAGGGTTGCTATGTCTGCATAATTATAGGTTACTGTGAGGGTGGAGATATGGCGGAAGCTATAAAGAAGACTAACGGTGTTCTGTTTCCCGAGGAGAAACTTTGCAAATGGCTCGTTCAACTTCTTATGGCACTTGACTACCTGCACATGAATCACATTCTTCATCGTGATGTCAAGTGTTCAAATATCTTCTTGACGAAAGATCGTGACATACGTCTAGGTGATTTTGGACTTGCCAAAATGTTGACTTCTGATGATCTTGCTTCCTCTGTTGTGGGAACTCCTAGCTACATGTGCCCTGAGCTCCTTGCTGATATACCTTATGGTTCTAAATCGGATATTTGGTCCTTGGGATGTTGTATATACGAAATGGCAGGACATAAGCCTGCATTCAAAGCATTTGATATACAAGCATTGATTATCAAGATTAGTAAGTCCATAGTGGCTCCACTACCAACAAAATATTCTAGTTCATTTCGAAGTCTGGTCAAAAGCATGCTGCGGAAAAATCCAGAGCTGAGGCCCAGTGCTTCTGAGCTTCTTGCGCATCCACATCTTCAATCCTATGTTTTAAAGATCCATCTCAAACTCAATAGCCCCAGGCGAAATACATTGCCTGTTCATTGGCAAGAGTCGAAGTACGCGAAGAAAACTAGATTTTTAGTTCCAGAAACTGTTAGAGATAAGCGCTATTCTTACAGTAATGACCGCACTCTAAATCCTAGTGTATCTGGAGCTGATCAAGATTCGGTATGCTCTACCCTAGAAATAGGTTGTACACCTGATCATTTGAATCAAAGGTTAGCAGAATTATGTACAGGTGATAGCCGTGACATGAAGTCAGTCCATAAACCTGTTGTTTCCAGAACTTCGAGTATTTCTAAGACTTCAAAGTTCAGTTCATCAAAAGTTTCTGGCACCAACAGGAAATCAATGGAACCCTCAAACAATCGCAAGGTGGTTAAGCACACTCTTCCTGTTTCACACAGCATCACAAACTCTGCTCATACAAATCGCAGAGCATCATTTCCATTGTCAACGAGGGGTGGTATTCAGGAGCTTCCTTCCAGGCAGAGTGTTGGTTTGCTTTGCCATGTCTCTTCACCAGATATCTCAGTCAACTCTCCTCGTATTGATAGGATAGCTGAATTCCCATTAGCATCATATGAAGATTGTTTGTTCCCTGTCAATAGAACGTCAACCTCTGCACAAGGTTCCTCAGGATTCCCATCTCATTCAACTGTGATAGACAAATGCACCATAGAGGTATGTGATAGAGCCTCTGTTAAGCCTAGTTCTACCGATGATTGGCAGGGAATCAAGCGCAGCATGTTAAAGGAAATTCATGAGGATAAAAGTGGTTCCTCCGATCAAAATGCAACAGCCGGTGCATCGAGCTACACATCTTCAGACTTGCAGCGCAGGCAGTTTGACACTTCATCTTTCCAACAAAGGGCTGAAGCTTTAGAAGGGTTGCTTGAATTCAGTGCTAGATTGCTCCAGCAAGCAAGGTATGATGAACTCGGAGTTTTGTTGAAACCATTTGGTCCCGAGAAGGTTTCCCCAAGAGAAACTGCTATCTGGTTGAGCAAGAGCTTCAAAGGGAACACTAACAACACAGAAGAATCCCCGTAA 1851 0.4241 MEQYEVLEQIGKGAFGSALLVRHKHEKKKYVLKKIRLARQTERSRRSAHQEMELISKLRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKTNGVLFPEEKLCKWLVQLLMALDYLHMNHILHRDVKCSNIFLTKDRDIRLGDFGLAKMLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMAGHKPAFKAFDIQALIIKISKSIVAPLPTKYSSSFRSLVKSMLRKNPELRPSASELLAHPHLQSYVLKIHLKLNSPRRNTLPVHWQESKYAKKTRFLVPETVRDKRYSYSNDRTLNPSVSGADQDSVCSTLEIGCTPDHLNQRLAELCTGDSRDMKSVHKPVVSRTSSISKTSKFSSSKVSGTNRKSMEPSNNRKVVKHTLPVSHSITNSAHTNRRASFPLSTRGGIQELPSRQSVGLLCHVSSPDISVNSPRIDRIAEFPLASYEDCLFPVNRTSTSAQGSSGFPSHSTVIDKCTIEVCDRASVKPSSTDDWQGIKRSMLKEIHEDKSGSSDQNATAGASSYTSSDLQRRQFDTSSFQQRAEALEGLLEFSARLLQQARYDELGVLLKPFGPEKVSPRETAIWLSKSFKGNTNNTEESP* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1346 616 PANTHER SERINE/THREONINE-KINASE NEK4 1 601 - -
Mal1g1346 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Mal1g1346 616 CDD STKc_Nek 3 258 - -
Mal1g1346 616 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Mal1g1346 616 SUPERFAMILY Protein kinase-like (PK-like) 1 307 IPR011009 -
Mal1g1346 616 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1346 616 MobiDBLite consensus disorder prediction 527 550 - -
Mal1g1346 616 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1346 616 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Mal1g1346 616 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1346 616 MobiDBLite consensus disorder prediction 357 386 - -
Mal1g1346 616 MobiDBLite consensus disorder prediction 355 389 - -
Mal1g1346 616 MobiDBLite consensus disorder prediction 521 550 - -
Mal1g1346 616 Gene3D Transferase(Phosphotransferase) domain 1 86 312 - -
Mal1g1346 616 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1346 Mal-Chr1 17409093 17414050 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1346 10 260 MAP Kinase Kinase Kinase AT1G53570 32.812 7.49e-39 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Mal1g1346 Pkinase 7.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1346 K08857 - gmx:100804898 1014.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1346 1 17409093 17414050 Mal1g1346 1 17409093 17414050 ECH