Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1338 ATGACTAACGTTGGGGGTGCAGAGAGAGACAAGTATAGCATGATAAATTTCGAGGAGACCGAGTTACGGCTCGGTCTCCCTGGAGCTAGTGATCTCGGAGAATCACCGGTTAAAAATAGTTGTGGAAAGAGAGGTTTCTCTGAAACTGCTAATGTTGATTTGAAGCTTAATCTTTCTCCAATAAATGATTCTGGTTCATCATCTTCAACTATAGCTTCTGTAGCTGAAAACAAAGGCAAAGACACAACAACTTCTTCTGCTACTGTTGCTGCTCCTCCTCGTGCTAAGGCACAAGTTGTGGGATGGCCACCAGTTAGATCCTTTAGAAAGAACATAGTAAATGTTCAAAAGATCAACAACGAATCAGAAGGGGATAAGAGCACAAGTGGTGGTGGGAATGGAGCATTTGTTAAGGTGAGCATGGATGGTGCACCATATCTACGTAAGGTGGACCTTAAATTGTACAAGAGCTACCAAGAGCTGTCAGATGCGCTGGCTAAAATGTTTAGTTCATTCACAATTGACAATTGTGGGTCCCAAGTCACCAAAGACTTTATGAATGAAAGCAAATTGATTGACCTTTTGAACGGTTCTGATTATGTACCAACATATGAAGACAAAGATGGTGATTGGATGCTTGTTGGTGATGTTCCTTGGGAAATGTTCGTTCAATCATGCAAGCGTCTCCGCATAATGAAAGGTTCTGAGGCAATTGGGCTAGCACCAAGGGCAGTGGAAAAATGCAAGAACAGAAGCTGA 759 0.4242 MTNVGGAERDKYSMINFEETELRLGLPGASDLGESPVKNSCGKRGFSETANVDLKLNLSPINDSGSSSSTIASVAENKGKDTTTSSATVAAPPRAKAQVVGWPPVRSFRKNIVNVQKINNESEGDKSTSGGGNGAFVKVSMDGAPYLRKVDLKLYKSYQELSDALAKMFSSFTIDNCGSQVTKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVQSCKRLRIMKGSEAIGLAPRAVEKCKNRS* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1338 252 MobiDBLite consensus disorder prediction 63 92 - -
Mal1g1338 252 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 12 245 IPR003311 GO:0005634|GO:0006355
Mal1g1338 252 Gene3D - 130 246 - -
Mal1g1338 252 PANTHER AUXIN-INDUCED PROTEIN AUX28 12 245 - -
Mal1g1338 252 SUPERFAMILY CAD & PB1 domains 128 233 - -
Mal1g1338 252 Pfam AUX/IAA family 19 243 IPR033389 -
Mal1g1338 252 MobiDBLite consensus disorder prediction 63 91 - -
Mal1g1338 252 ProSiteProfiles PB1 domain profile. 134 234 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1338 Mal-Chr1 17233639 17236561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1338 126 242 B3 DNA Binding Superfamily AT4G23980 30.769 3.92e-08 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mal1g1338 AUX_IAA 6.3e-86 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1338 K14484 - pop:7474609 339.347