Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1312 ATGCCTACTCATCCAAAGGCTGCCAAGGCCTATAATGCTATGGAGGCCTTAGGAATCTCCGAGAAAGATGTGAAACCAGTGTTGATTAATTTGTTTAAAGTGTATGATGGAAACTGGGAACTCATAGAAGATGACAATTATCGGGCACTTATAGATGCATACTTTGAGTCAAAGGAAGATAAGCAAGAAGAACATAAGAGAAAAGCTCCAATCAGCTTTCATGATGGAGGAGAAAGACCAAAACAGAAACTTCACTTGGTAGATAAGGACAACCAGGTTTCATCAGCTGACAACTCAAGACAAGTGTTGTCTGTAGAAGACGGTGTCAAACCTCCAAAGACTTTTAAACAGGAAATTATGAAACCATCTCAAACTTCCAGGCAAGATATGAAGCCCACAACCAGTTCACACCCACTGCAGAAAAGGATGAGCGGCGATGAAAGGATATCAAGTTTACCTTCAATGGCTGGTAGAGATAGAAAAATTTATCCTGGGGCAGCATCGTCTGGAAGGCATTGTAAAGATCCAATTGATGAACCTAGGCATCCTTGTATTCAGAGGAAAAATATGTCAAGTGATCACTATCAGAAGAAGATTACCTCGGGAACTGAGAAACCCAAGTTTCATCATGGATCTGTTTCGACGAGTTACAATGGCTCACCTGATGCTTCGAATGGAAATCATTCTTTCAAATCCCTGTCCAAGGTGTATCAGAATACACACAAGATAGAAGATAGCTCCACATGCAATAAAAACACCACAACCAGTAAGGGTAATATTGATATTGCTTCTTCACCCTTGGGAGAAGTTAAAATTTCTCTAAATTGTGATGCTGCGTTGGGAAACCCAAATTTCCATGTTCCTAATTTGGATGGTGTTATGAAATCCGTGGAGGAGAAATACCTGAGGACTTCCAAGATTGTTGAGCCCCAACGATCGATGACAGAGCTATTAGGTGATTTATGCAGAAGTTTTTTGAAGATGGGCTTGAATTTAAATCAAAAGGGGTCAAGGCGAGCTCTTGCTGAGGATGAAAAGAAATCATTTAGATATGTCGATGACATAACTAAAGGTTCAGAAAATGTTAAAATATCATTATTAGATGAAACTGAAAGTGAGGATTTTCCAAAGTTTAATTACATACCACATAACATAATATATCAAAGTGCTAATGTGAATATTTCACTTGCTCGGATCGCGGATATAGATTGTTGTTCTGATTGTTCAGGCAACTGTCTTGACTTGTCATTTCCTTGTGCGTGCTCACAGGAAACTGGTGGAGATTTTGCTTACACCTCACAAGGTTTGTTAAAAGAAAAGTTTTTAACAGATTGCATTATGGAACCCCAAGATAATCATTATGTGTATTGTAAAGAATGTCCAATTGAGAGGTCTAAGAATGAGACCAAACCTGAACCATGCAAGGGACATCTGGTTAGGAAGTTTATAAAGGAGTGCTGGAGGAAATGTGGATGCGACATGCAGTGTGGAAATCGGGTAGTGCAACGAGGTTTAAGCCGTAAATTGCAGGTGTTCTTGACTGAAGAAGGAAAGGGCTGGGGTGTTAGAACACTAGAATATTTGCCCAAGGGAAGTTTTGTATGTGAATATGCTGGGGAGATTTTAACTAATACAGAATTATATGAAAGGATTGTACATAGTAGCGGCAATGACAGACATACATATCCTGTAACGCTGGATGCAGACTGGGGCTCAGAAGTGGGATTAAAGGATGAAGAAGCATTATGCTTGGATGCAACACATAATGGGAATGTTGCAAGATTCATCAATCATAGATGCTGTGACGCAAATCTAATAGACATTCCTGTTGAAGTGGAGACACCTGACCGCCACTATTATCATCTTGCCCTCTTTACAAACAAAGATGTGAGTGCATACGAGGAGTTGACATGGGATTATGGTATTGACTTTGATGACCATACCCATCCTATTAAAGCATTTCAATGTTGCTGTGGAAGCGCTTTCTGCCGTGATAAGAAACAAAAAGGAATTAGATTAGCAAAGACAAAAAAACTCAAGCATACATATACAAAGAAATAG 2061 0.3945 MPTHPKAAKAYNAMEALGISEKDVKPVLINLFKVYDGNWELIEDDNYRALIDAYFESKEDKQEEHKRKAPISFHDGGERPKQKLHLVDKDNQVSSADNSRQVLSVEDGVKPPKTFKQEIMKPSQTSRQDMKPTTSSHPLQKRMSGDERISSLPSMAGRDRKIYPGAASSGRHCKDPIDEPRHPCIQRKNMSSDHYQKKITSGTEKPKFHHGSVSTSYNGSPDASNGNHSFKSLSKVYQNTHKIEDSSTCNKNTTTSKGNIDIASSPLGEVKISLNCDAALGNPNFHVPNLDGVMKSVEEKYLRTSKIVEPQRSMTELLGDLCRSFLKMGLNLNQKGSRRALAEDEKKSFRYVDDITKGSENVKISLLDETESEDFPKFNYIPHNIIYQSANVNISLARIADIDCCSDCSGNCLDLSFPCACSQETGGDFAYTSQGLLKEKFLTDCIMEPQDNHYVYCKECPIERSKNETKPEPCKGHLVRKFIKECWRKCGCDMQCGNRVVQRGLSRKLQVFLTEEGKGWGVRTLEYLPKGSFVCEYAGEILTNTELYERIVHSSGNDRHTYPVTLDADWGSEVGLKDEEALCLDATHNGNVARFINHRCCDANLIDIPVEVETPDRHYYHLALFTNKDVSAYEELTWDYGIDFDDHTHPIKAFQCCCGSAFCRDKKQKGIRLAKTKKLKHTYTKK* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1312 686 MobiDBLite consensus disorder prediction 118 140 - -
Mal1g1312 686 MobiDBLite consensus disorder prediction 172 205 - -
Mal1g1312 686 MobiDBLite consensus disorder prediction 58 90 - -
Mal1g1312 686 Pfam SET domain 519 641 IPR001214 GO:0005515
Mal1g1312 686 MobiDBLite consensus disorder prediction 58 230 - -
Mal1g1312 686 ProSiteProfiles Pre-SET domain profile. 408 504 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal1g1312 686 SUPERFAMILY SET domain 362 664 IPR046341 -
Mal1g1312 686 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 679 IPR025776 -
Mal1g1312 686 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 680 - -
Mal1g1312 686 SMART set_7 507 647 IPR001214 GO:0005515
Mal1g1312 686 SMART preset_2 352 491 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal1g1312 686 Pfam Pre-SET motif 355 499 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal1g1312 686 Gene3D - 1 60 IPR043017 -
Mal1g1312 686 CDD SET_SETDB-like 376 641 - -
Mal1g1312 686 MobiDBLite consensus disorder prediction 207 230 - -
Mal1g1312 686 Gene3D SET domain 331 651 IPR046341 -
Mal1g1312 686 ProSiteProfiles SET domain profile. 507 641 IPR001214 GO:0005515
Mal1g1312 686 Pfam Ubiquitin-binding WIYLD domain 6 59 IPR018848 GO:0018024
Mal1g1312 686 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 1 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1312 Mal-Chr1 16786855 16794896 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1312 352 664 Su(var)3-9 homologs AT5G04940 27.327 2.36e-31 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal1g1312 Pre-SET 4.5e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1312 - - gsj:114402909 1000.35