Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1301 ATGTGCGAAACCCTAAAAACAAAGTACCAACTCAGCGAGGAGATCGGTCGTGGCCGTTTCGGTACCATTTTCCGGTGCTACCACCCTGACTCCGCCGTCCCCACCGCCGTCAAAGTCATCGACAAATCTCTCCTCTCCGATTCAACCGATCGTGAGTGTCTCCAAAACGAACCAAAATTCCTCTCTCTCCTTTCTCCTCACCCTAACATCCTTCAAATCTTCGACGTTTTCGAAAACGACGATTTCTTATCCATCGTCTTAGAGCTTTGTCAACCTCACACTCTCCTCGATCGCATCGTTTCAAATCCTTTCACCGAACAACAAGCCGCTGCAACAATCAAAAAGCTTCTCGAAGCCGTCGTTCACTGCCACCGTCTCGGCGTCGCGCACCGTGACATCAAGCCGGACAACATTCTCTTTGATTCTGAAGATAATCTCAAATTAGCCGATTTCGGTTCGGCGGAATGGTTCGGCGACGGCGAAACCATGAACGGAGTCGTCGGAACGCCGTATTACGTGGCGCCGGAGGTTCTTTTAGGAAGAGATTATACAGAGAAAGTTGATGTGTGGAGTGTTGGTGTGTTACTGTACATAATGTTGAGCGGAGTTCCACCTTTTTACGGTGATTCTACGGCTGAGATTTTTGAAGCGGTTATTAGAGCGAATCTCAGGTTTCCTTCTAGAATCTTCCGTTCTGTTTCTTCTTCTGCTAAGGATCTCTTGAGGAAGATGATTTGTAGAGATGCTTCTAGAAGATTTTCTGCTGAACAAGCCTTGAGTATGTTACTTATCATCATTATTATAACTAATTTTGATTAA 819 0.4603 MCETLKTKYQLSEEIGRGRFGTIFRCYHPDSAVPTAVKVIDKSLLSDSTDRECLQNEPKFLSLLSPHPNILQIFDVFENDDFLSIVLELCQPHTLLDRIVSNPFTEQQAAATIKKLLEAVVHCHRLGVAHRDIKPDNILFDSEDNLKLADFGSAEWFGDGETMNGVVGTPYYVAPEVLLGRDYTEKVDVWSVGVLLYIMLSGVPPFYGDSTAEIFEAVIRANLRFPSRIFRSVSSSAKDLLRKMICRDASRRFSAEQALSMLLIIIIITNFD* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1301 272 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Mal1g1301 272 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Mal1g1301 272 SUPERFAMILY Protein kinase-like (PK-like) 5 260 IPR011009 -
Mal1g1301 272 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Mal1g1301 272 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 2 3 264 - -
Mal1g1301 272 CDD STKc_CAMK 8 260 - -
Mal1g1301 272 Pfam Protein kinase domain 9 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1301 272 SMART serkin_6 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1301 272 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 264 - -
Mal1g1301 272 Gene3D Transferase(Phosphotransferase) domain 1 93 265 - -
Mal1g1301 272 ProSiteProfiles Protein kinase domain profile. 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1301 272 PIRSF ILK 2 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1301 Mal-Chr1 16642419 16643237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1301 9 259 EF-hand Containing Proteins AT5G19450 43.922 3.16e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mal1g1301 Pkinase 1.9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1301 - K08794 gmx:548089 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1301 1 16642419 16643237 Mal1g1301 1 16642419 16643237 ECH