Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1300 ATGTTTATTTATAGGAAGTTAATTTTGGAGATGGATGACAATGAAGTTGATTTAGCTACACATACAGAAGAGTTCAATGAGCTAGAAAACAAGTCGAAGGAATGGATTCCACAGTGCGATGCTGAACTGAAACCTGTGATTGGTAAGGTCTTTGATACTTTACTAGAAGCGGGTGATTTTTATAAAAACTATGCACATGCTATTGGTTTTAGTGTGCGTAATTCAACTGAAACAAAAGATACAAATGGTGTCAGATGGAAGTATTCTCTTTGCTCAAAAGAGGGTTTTAAAATGGAAAAAAAGGTAGACGAGCCTAAGTTGCTTATTAGTGAAGATAGTTTGCCTAAAGGTAGAAAAAGAAAATTGACCCGGGACGGATGTAATGTAAGAATTGTTTTCAGGAGAAATGATGAGGGTAAGTTTGAAGTCTCAAAATTTTATGAAGGTCATTCACACACACTTGTCACACCTATAAAGAAACAGTTGTTAAGATCGGCAAGGAGTGTCAACAGTGTTCATAAGAATTTATTATTTGCTTGCAATAGAGCTAATGTGGGGACTTCAAAAGGTTATCAAATATTGAAGGAGCAGGTTGGGAGTTATGAAAATATAGGATGCACACAAACAGACTTTCAAAATTTTTCAAGGAATATGAAAGAATTGATCAAAGATTCTGATGCAGATATGTTCATTGATAATTTTAAAAGAAAACATGAGATGAACAATTCTTTTTTCTATGATTATCAATCTGATAATGATGGGAAGTTGAAATATATGTTTTGGGCCGATGGCATTTCTCGAAAAAATTACTCTTTGTTTGGAGATGTGGTTTCATTTGATACTACATATAGTACAAATAAGTATCATCAGGTTTTTGCACCATTCACTGGTGTAAATCATCATTGTCAAAGCATAACCTTTGGAGCCGCATTTTTAGCTGATGAAAAAGAAGAGTCATTTGTGTGGTTGTTTGAGACATTTTTGAAAGCAATGGGTGGGAATAAACTTGTTATGATAATAACAGATCGAAACCATGCTATGAAGAATGCGATTGAAAGGGTTTTAAAAGGGTCATCTCATAGATTTTGCATGTGGCATATTCTAAAAAAACTTTCAGAAAAGGTGGGTGGCACCTTAAATCAGAATGATGATTTTAATAATCGTCTCAATTCATGTATTTGGAACTCAGAGTCCTCTGAGGAATTTGAACTTGAATGGAATGATATTATTAGTGATTTCAAGTTGGAAGAAAATGGTTGGCTTTCTACAATGTATGAACTTAGACGCATGTGGATACCAGCTTATTTCAAAGATATATCTATGGCTGGAATTTTGAGAACAACCTCAAGATCAGAGAGTGAAAATTCATTCTACGGCAGCTATTTGAATAAAAAGCTTAATTTGGTTGAGTTTTGGATGCGGTTTGATTCTGCTTTAGAAGCACAAAGACACAAAAAACTTCTTGCAGATAATGATACTCTCCATTCTTTTCCAGCATTGAGGATGCACGTCGATTTAGAGAAGCATGGTAGAGAGGTTTATACTCATGAAATTTTTTACATATTTCAGAGTGAGTTATGGAATGCATGTGTAAATTGTGGAATTGAAGTAACAAGACAGGAAGGTGATGATTTAATATTTTCTATACTTGATAATTTTGTGGTCAATGGCACAAAGGTGAGCAAACATAGAGAAGTTGTTTTAAGTCTTTCTAATAACATTGTACATTGTTCATGCAAAATGTTTAAATCTGAAGGCATTATATGCCGACATATTCTTTCTGTATTAAAGGGAAGAGGTTTTAGTGAAATTCCAAGTCATTACATTGTCAATAGATGGACGAAATTGGCAACAAGTAGACCGGTATTTGATTGTGATGGAAACTTATTGGAGGCATGTTCTAAAACGGAAAGTGAGCAGACATTAATTTCAAAAGCATGGGCACAGTTGCTTAAGTGCATGCATATGGCTGGTACAAATAAAGAGAAATTGCTCCTCATTTACAATGACGGTTGTAATATTGAATCCAAATTGTCTAATATGAAGAGCAATGATGTATCAACACCCTTGGATGATGTGGAGGCTTTTATTGGATCCAATGTACCTAAGAAAATTCAAATTCTTCCACCTGAATCGTTAAATACCAAAGGTTGTGGAAAACAAATTAAAGGGGGGAAAGAGAAGGCAATAGAGCAACAACAAAAGAGAACAAGGCTTTGTAAAACTTGTAAGCGATTTGCGTCTCATGATAGTCGCAATTGTCCCACAAAATCCTCTTCATAG 2283 0.346 MFIYRKLILEMDDNEVDLATHTEEFNELENKSKEWIPQCDAELKPVIGKVFDTLLEAGDFYKNYAHAIGFSVRNSTETKDTNGVRWKYSLCSKEGFKMEKKVDEPKLLISEDSLPKGRKRKLTRDGCNVRIVFRRNDEGKFEVSKFYEGHSHTLVTPIKKQLLRSARSVNSVHKNLLFACNRANVGTSKGYQILKEQVGSYENIGCTQTDFQNFSRNMKELIKDSDADMFIDNFKRKHEMNNSFFYDYQSDNDGKLKYMFWADGISRKNYSLFGDVVSFDTTYSTNKYHQVFAPFTGVNHHCQSITFGAAFLADEKEESFVWLFETFLKAMGGNKLVMIITDRNHAMKNAIERVLKGSSHRFCMWHILKKLSEKVGGTLNQNDDFNNRLNSCIWNSESSEEFELEWNDIISDFKLEENGWLSTMYELRRMWIPAYFKDISMAGILRTTSRSESENSFYGSYLNKKLNLVEFWMRFDSALEAQRHKKLLADNDTLHSFPALRMHVDLEKHGREVYTHEIFYIFQSELWNACVNCGIEVTRQEGDDLIFSILDNFVVNGTKVSKHREVVLSLSNNIVHCSCKMFKSEGIICRHILSVLKGRGFSEIPSHYIVNRWTKLATSRPVFDCDGNLLEACSKTESEQTLISKAWAQLLKCMHMAGTNKEKLLLIYNDGCNIESKLSNMKSNDVSTPLDDVEAFIGSNVPKKIQILPPESLNTKGCGKQIKGGKEKAIEQQQKRTRLCKTCKRFASHDSRNCPTKSSS* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1300 760 Pfam SWIM zinc finger 572 596 IPR007527 GO:0008270
Mal1g1300 760 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 219 627 IPR031052 GO:0006355
Mal1g1300 760 Coils Coil 11 31 - -
Mal1g1300 760 ProSiteProfiles Zinc finger SWIM-type profile. 564 600 IPR007527 GO:0008270
Mal1g1300 760 SMART 26again6 575 602 IPR006564 GO:0008270
Mal1g1300 760 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 37 173 - -
Mal1g1300 760 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 37 173 IPR031052 GO:0006355
Mal1g1300 760 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 219 627 - -
Mal1g1300 760 Pfam FAR1 DNA-binding domain 59 155 IPR004330 -
Mal1g1300 760 Pfam MULE transposase domain 276 370 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1300 Mal-Chr1 16612912 16615194 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g1300 FAR1 2.6e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1300 - - soe:110798711 778.089