Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1293 ATGGCAAACAGGTGGTGGACCGGACCGGTTGGTTTAGGAGGGATGGACAACTCAGCAACATCCTCTCCACTAGGAAAACCGGATCTGGGTTTCTCCATGAACCAACAAAGTGCAGTAACAGGAGTGAACATGAACAACAACAACAACAACAATGAAGAAGAAGAAGATGAGAAAGAAAACAGCGACGAACACAAAGGAGGTGCAATAGAAACAAACACATCCACGCGCCGCCCAAGAGGGCGTCCATCAGGTTCAAAAAACAAACCAAAACCACCGATATTCATAACAAGAGACAGCCCTAACGCGCTTCGAAGTCACGTCATGGAAGTAGCAACAGGAACTGATATATCAGATAGCATCGTTCAGTTTGCAAGAAAAAGACAGAGAGGTATTTGCATTCTAAGCGCAAGTGGAACCGTCGTAAATGTTTCTCTCCGGCAACCAACAGGTCCCGGAGCTGTGGTGGCGCTTCCAGGGAGATTTGATATTCTGTCGTTGACTGGTTCGGTTCTACCTGGACCTTCACCGCCGGGAGCTACTGGTTTGACTATTTATCTTTCTGGAGGACAAGGACAGGTGGTTGGCGGTGGGGTGGTTGGGCCGCTTGTGGCGGCCGGGCCGGTTATGTTGATGGCGGCGACTTTTTCGAATGCGACGTATGAGAGGCTGCCTGTTGAAGATGGTGATGATCAGGAAGGGCAGCAGGGTGGTGGTGATGAGTCATCTCCGACCGGGGCGGGCGCCGGGATGGGACAGTTAGCAATTGGATCTGTTGGAGAAGGTTCTTCAATTCCGCCGGGTTATAATAATGTTGGTGGTAATTTGGGTGTTTCAAATGGAGGACAACAACAACAGTTATTGAATAATCATGAAGCTTATAATTCTCCTTGGGGTCATGCTAGTCATGGTAGACCACCATACTAA 924 0.4903 MANRWWTGPVGLGGMDNSATSSPLGKPDLGFSMNQQSAVTGVNMNNNNNNNEEEEDEKENSDEHKGGAIETNTSTRRPRGRPSGSKNKPKPPIFITRDSPNALRSHVMEVATGTDISDSIVQFARKRQRGICILSASGTVVNVSLRQPTGPGAVVALPGRFDILSLTGSVLPGPSPPGATGLTIYLSGGQGQVVGGGVVGPLVAAGPVMLMAATFSNATYERLPVEDGDDQEGQQGGGDESSPTGAGAGMGQLAIGSVGEGSSIPPGYNNVGGNLGVSNGGQQQQLLNNHEAYNSPWGHASHGRPPY* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1293 307 Coils Coil 44 64 - -
Mal1g1293 307 MobiDBLite consensus disorder prediction 14 49 - -
Mal1g1293 307 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 8 307 IPR014476 GO:0003680
Mal1g1293 307 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 8 307 - -
Mal1g1293 307 CDD DUF296 104 187 IPR005175 -
Mal1g1293 307 MobiDBLite consensus disorder prediction 225 282 - -
Mal1g1293 307 MobiDBLite consensus disorder prediction 263 282 - -
Mal1g1293 307 PIRSF ESCAROLA 20 307 IPR014476 GO:0003680
Mal1g1293 307 Pfam Plants and Prokaryotes Conserved (PCC) domain 104 217 IPR005175 -
Mal1g1293 307 SUPERFAMILY AF0104/ALDC/Ptd012-like 100 227 - -
Mal1g1293 307 MobiDBLite consensus disorder prediction 1 100 - -
Mal1g1293 307 Gene3D - 103 232 - -
Mal1g1293 307 ProSiteProfiles PPC domain profile profile. 100 235 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1293 Mal-Chr1 16493908 16494831 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1293 1 307 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 50.938 1.69e-80 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1293 - - gmx:100795097 320.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1293 1 16493908 16494831 Mal1g1293 1 16493908 16494831 ECH