Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1290 ATGGAAGCCAACAACAACAACAACCAAGTGACCTCATTGTTCGAGCAACAGAGCACCGTTAACCCTTCTCCTCAACTTAACGGAACAACCACTGATGGGTCCCACACCGACGTTCATTCCGTTACGGAGAACAAGAAGAAGCGTGGTAGACCCAGGAAGTACGAGTCTCCCGAGGAAGCTATAGCCGGAAGGAAAGCTATCGCTGCAAGAAAAGCCGCCGCCGCTGCTGCTGCTGCCGCCGCCGCGGCTGCTACCGCTACGACATCGTTTGCATCTCCTAACCTCAACAAGCCCAAAAAGTTTCATTCATCTTCTCTAGGGAATTCAAGAGAGGGTTTCAATATCCACTTTGTTACTGTTGCTCCTGGTGAGGATATTGGCCAAAATATTATGATGCTCATGCAAAAAAATAGTAGGTGTGAGATGTGCATTTTGTCTGCATCTGGTTCCATCTCTAGTGCCACTCTTCGTCAGCCAGCAACCTCTGGAGGCAATATCACATACGAGGGTCGCTTTGACATTATTTCACTTACCGGATCATATGTCCGCAATGAACTTGATGGTCGTTCTGGTGGTCTCAGTGTATGCTTATCTCATTCTGATGGGCAACTTGTAGGTGGAAGCATTGCTGGACCCCTTAAAGCCGCTAGTCCAGTTCAGGTCATTGCTGGCACATTTTCTATTCCCTCCAAGGACACTGGTGCTGGTATAAAAGGCGATGTTTCTACCAGCAAGTTACCATCACCAGTTGCTGAACCAGCATCCAGTTTAGGTTTCCGCCCAGCAATCAACTCTTCCAATGGGAATGCAATACCGGGAAACAAGGAGCATCAAACTATTGGGGGAAGTCATTTCATGCCTCAGCAATATGGTGTAAATGTGGTACCTTTCCATCCCTCGGATTGGGGAAGTCGTCCAGATTCAAGAAATGCTGGCTTTGACATGATAGGAAGAACAGGTCACGGAGCGAACTACTCTCCTGAGAATGGAAACTATTCCTAA 1002 0.478 MEANNNNNQVTSLFEQQSTVNPSPQLNGTTTDGSHTDVHSVTENKKKRGRPRKYESPEEAIAGRKAIAARKAAAAAAAAAAAAATATTSFASPNLNKPKKFHSSSLGNSREGFNIHFVTVAPGEDIGQNIMMLMQKNSRCEMCILSASGSISSATLRQPATSGGNITYEGRFDIISLTGSYVRNELDGRSGGLSVCLSHSDGQLVGGSIAGPLKAASPVQVIAGTFSIPSKDTGAGIKGDVSTSKLPSPVAEPASSLGFRPAINSSNGNAIPGNKEHQTIGGSHFMPQQYGVNVVPFHPSDWGSRPDSRNAGFDMIGRTGHGANYSPENGNYS* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1290 333 SUPERFAMILY AF0104/ALDC/Ptd012-like 112 227 - -
Mal1g1290 333 MobiDBLite consensus disorder prediction 38 59 - -
Mal1g1290 333 CDD DUF296 114 226 IPR005175 -
Mal1g1290 333 Pfam Plants and Prokaryotes Conserved (PCC) domain 115 226 IPR005175 -
Mal1g1290 333 Gene3D - 114 238 - -
Mal1g1290 333 MobiDBLite consensus disorder prediction 1 37 - -
Mal1g1290 333 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 4 327 - -
Mal1g1290 333 MobiDBLite consensus disorder prediction 1 59 - -
Mal1g1290 333 ProSiteProfiles PPC domain profile profile. 109 249 IPR005175 -
Mal1g1290 333 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 4 327 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1290 Mal-Chr1 16458748 16464822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1290 45 332 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 44.625 1.50e-63 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1290 - - gmx:100809675 343.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1290 1 16458748 16464822 Mal1g1290 1 16458748 16464822 ECH