Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1286 ATGGCTTCTCTATCTTGCTCAGCCACAGACCTCGCCCCACTCCTCACCACCACCGCAAATGCGACTGCCGTCGCAGACTACATCTGCACCCAATTCAACACCATCTCAAATAAACTCAGTGACACCACCTACGCGGTAGACAACACCTACCTTCTCTTCTCAGCATATTTAGTTTTCGCCATGCAGCTCGGTTTCGCCATGCTCTGTGCCGGCTCTGTTCGAGCCAAAAATACTATGAACATCATGCTCACCAATGTCCTCGACGCCGCAGCCGGTGGTCTCTCCTACTATCTATTTGGCTTTGCTTTCGCCTTCGGAGCACCCTCCAACGGCTTCATCGGCCGCCATTTTTTCGGGCTAAGGGATTACCCTTCACCTTCCGGTGACTACAGCTTCTTCCTCTACCAATGGGCCTTTGCCATCGCCGCCGCCGGTATCACAAGTGGATCCATTGCAGAGAGAACTCAATTCGTTGCTTATCTCATATATTCTTCTTTCTTAACAGGTTTTGTTTATCCCATCGTTTCACATTGGGTTTGGTCCGCCGATGGTTGGGCTAGCCCAACGCGAACCGATGGTGATGTTTTATTCGGGTCTGGCGTCATCGACTTTGCTGGTTCAGGTGTGGTTCACATGGTTGGTGGAATAGCAGGGTTATGGGGAGCATTTATAGAAGGTCCTAGAATAGGACGGTTCGACCGGACGGGTCGGTCCGTTGCATTAAAAGGACACAGCGCGTCTTTAGTAGTGTTAGGTTCGTTTTTATTGTGGTTCGGTTGGTACGGGTTTAATCCCGGTTCGTTTTTAACAATTGTAAAAGGCTACGGAAATAATAAAGGGAGTTATTATGGTCAATGGAGTGCTATTGGAAGGACGGGTGTCACAACGACGTTGGCTGGATGCACTGCGGCTTTAACAACTTTGTTCAGTAAACGGTTATTAGTTGGACACTGGAATGTGATTGACGTGTGTAACGGTTTACTTGGGGGTTTTGCTGCTATAACTGCGGGATGTTCCGTTGTAGAACCGTGGGCCGCAATTGTATGTGGGTTTGTTGCGGCATGGGTTTTGATTGGACTTAATAAATTGGCGGTTAAAGTAAAGTATGACGATCCTTTAGAGGCGGCGCAGTTACACGGAGGATGTGGCGCGTGGGGGGTGTTATTTACGGGATTGTTTGCAAAGGGAGAATATGTTGACGAGATTTATGGGATTGGGAGGCCGTATGGATTATTGATGGGTGGTGGTTGGAGGTTGTTTGCGGCGCAAGTGGTTGAGGTGTTGGTGGTGTGTGTGTGGGTGACGGTTACGATGGCCCCGTTGTTTTATGGATTGAATAAGATGAAATTGTTGAGGATATCAAGGGATGATGAGACTGCGGGAATGGATTTGACTAGACATGGTGGGTTTGCTTATGCGTATCATGATGAGGAAGATGATGAGTCGATTAGGAAAATGGGATTTATGATGGGTAGGATTGAGCCCGCCATGAGTGTATCTCCCACCGTCGTGACTACACCTGTACCTGATTCATCTTTGCCAATCACTCAATCACCGGTGTGA 1563 0.4843 MASLSCSATDLAPLLTTTANATAVADYICTQFNTISNKLSDTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGAPSNGFIGRHFFGLRDYPSPSGDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWVWSADGWASPTRTDGDVLFGSGVIDFAGSGVVHMVGGIAGLWGAFIEGPRIGRFDRTGRSVALKGHSASLVVLGSFLLWFGWYGFNPGSFLTIVKGYGNNKGSYYGQWSAIGRTGVTTTLAGCTAALTTLFSKRLLVGHWNVIDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAWVLIGLNKLAVKVKYDDPLEAAQLHGGCGAWGVLFTGLFAKGEYVDEIYGIGRPYGLLMGGGWRLFAAQVVEVLVVCVWVTVTMAPLFYGLNKMKLLRISRDDETAGMDLTRHGGFAYAYHDEEDDESIRKMGFMMGRIEPAMSVSPTVVTTPVPDSSLPITQSPV* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1286 520 PANTHER AMMONIUM TRANSPORTER 1 505 - -
Mal1g1286 520 TIGRFAM amt: ammonium transporter 47 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mal1g1286 520 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Mal1g1286 520 PANTHER AMMONIUM TRANSPORTER 1 505 - -
Mal1g1286 520 Gene3D Ammonium transporter AmtB like domains 24 489 IPR029020 -
Mal1g1286 520 Pfam Ammonium Transporter Family 50 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Mal1g1286 520 SUPERFAMILY Ammonium transporter 44 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1286 Mal-Chr1 16419604 16421166 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1286 2 506 Inorganic Solute Cotransporters AT1G64780 77.148 0.0 782
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1286 K03320 K07573 gmx:100797209 815.068