Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1280 ATGGAGAGGAATGTATATGCATTGTTTGTGATGTTAATATTTACTCTTATTTTCTGTCTATCTGAAGGGCTTAATGCAGAGGGCAAATACCTTATGGACATAAAAATGAGATTGTTTGACAAATACAATCATCTTAACAACTGGAACTCAAGTAATTCCACACCTTGTAGTTGGAAAGGTGTCACCTGCAATAGTGACATCAATCCAGTGGTGGAGTCTCTTGACTTGCATGCAATGAATCTCTCAGGATCTTTGTCTTCCAGCATTGGTGGTTTGGTTCACTTACTTCACCTTAATCTGTCTCAAAACACTTTCTCTGGTTTTATACCAAAGGAAATTGGAAACTGTTCAAGTTTGCAGGTTCTTAGCCTCAACATTAATCAATTTGAAGGTCGAATTCCTGTTGAAATAGGCCGGCTTTCGAATTTAACCGAATTGCATCTTTCCAACAACCAACTCTCTGGACCTTTTCCAGATGAATTTGGTAATCTTTCTTCACTCTCAATACTTACTGTTTACACAAATCATCTTAGTGGGACTTTGCCGTCTTCTATTGGGAAGCTTAAAAGACTGATAAAGTTTCGAGCCGGACAGAATATGATCTCAGGAAGTCTGCCTCAAGAGATAGGTGGATGTGAAAGCTTGGAGAATCTTGGTTTAACTCAAAATCGGATAAGTGGTGAAATACCGAAAGAACTTGGTTTACTCAAGAACTTGCAATTTTTGGTCCTTAGGGAAAATAATCTTCATGGTGCTATACCTAAAGAGCTTGGAAATTGTACAAATTTGGAGGTTCTTGCTCTCTATCAGAACAATCTTGAGGAATCAATTCCAAAGGAGCTTGGAAACCTTGTAGTCCTAAAGAGACTATACCTTTACAGGAATGAGTTAAAAGGAAATATTCCAAGGGAGATTGGAAACCTTTCTGTTGCAATTGAGATTGATTTTTCAGAGAATCTTCTTACAGGAAAGATACCGATCGAGTTGGTTAATATAAAAGGCTTGCAATTGCTTCATCTCTTTCAGAACAAGTTAAGCGGCGTAATTCCAAATGAGTTAACCACTTTGAAAAACTTGACTGATTTGGATCTCTCTATCAATTATCTCAATGGTACTATTCCTATTGGATTTCAGGATTTAACCAAACTTAAGTCATTGCAACTCTTCAACAACTCATTAAGTGGTAGAATTCCTTATGCACTTGGAGCAAATAGTCCACTTTGGGTGATTGATTTGTCATTCAACTTTTTGGTTGGAAGAATTCCAGTTAACCTTTGCCAATTATCTAACTTGATGATGTTGAACTTAGGATCAAACAAACTCACCGGAAATATTCCTTATGGAATTACAAGCTGCAAGTCTTTGGTGTATCTTCGCCTCTTCGGTAACAACTTGAGGGGCAAGTTTCCTTTTGATTTATGCAAGCTTGTAAATCTTTCTACAGTTGAGTTGGATCAGAATGAATTCATTGGTTCAATTCCTCCGCAAATTGGTAACTTCAAAAATTTGCAACGACTTCACCTCTCTAACAACCATTTTTCATCTGAATTGCCGAAAGAAATCGGTAACCTCTCTCAGTTGGTCTCATTTAATGTTTCATCAAATTATCTTTTCGGTCGAGTGCCTATGGAACTATTCAAATGCAGGAAGCTACAAAGACTTGATCTCAGCGGCAACGAATTCGTAGGTACTTTATCAGGTGAGATAGGAAATCTTTTACAGTTAGAGCTTCTGAGGCTCTCACATAACAACTTTTCTGGCAACATTCCCTCAGAAGTTGGAAAACTCTTGCGGCTGACCGAGCTACAAATGAGTGAAAACTCATTTTATGGTTATATTCCACAAGAGTTAGGTTCCATCTCCTCCTTGCAAATTGCATTGAATCTCAGCTATAATAAACTTGCAGGACAAATACCCTCTAAACTTGGGAATCTTATTATGCTAGAATCCCTTCAACTTAATAACAACCATTTGAATGGCGAAATTCCAAACTCGTTTAACAGACTTTTAAGTTTACTTTCTTTCAATTTCTCATACAATGATCTTATAGGCCCTTCACCTTCTTTACCTCTCTTTCAAAACTCAACATTCAGCTGCTTTTCGGGTAACAAAGGTCTCTGTGGAGGACACCTTATCCCTTGTCCAAATTCACCTTCACATTCACATCCAAATAAACTAGGAAAAATTCTTGCTATAGCTGCAGCAATTGTTAGTGGAGTTTCATTAGTTTTAATTCTTGTTGTTATATATCTCATGAGAAATCTCACTGTGCCAAACCAAGTTATAGATAAACCAAATTATCCAAATGTTTCAAACATGTACTTTTTCCCAAAAGAGGAGTTGAGTTTTCAAGACATGGTTGAAGCTACTGAAAATTTTCATTCCAAATATGTTATTGGAAAAGGTGGTAGTGGAACTGTATATAGAGCAGATATATCAACTGATCATACAAATATGAAAACAGTTGCTATAAAGAAACTTACATCAAACAGTCACAGCAACAGCATTGATGTAAATGGCTGCTTCCGCGCCGAAATCTCAACTTTAGGAAAAATAAGGCATAGAAATATTGTGAAGTTATATGGTTTCTGCAACCATAGTGGCTCAAGTATGATATTTTATGAGTACATGGAAAAGGGAAGTTTGGGAGAGTTACTTCATGGAGCATCTTCATCCACCCTTGATTGGTATTCAAGGTTTAGGATTGCTCTTGGAACTGCACAAGGACTGTCTTATTTGCACCATGATTGCAAGCCTAGGATTATCCACCGTGATATCAAGCCCAATAATATACTTATTGACCATGAATTTGAAGCTCATGTTGGTGATTTTGGTTTGGCTAAGCTAATTGATATCTCAAGGTCCAAATCAGTGTCTGCTGTTGTTGGTTCTTTTGGCTACATTGCCCCTGAGTATGCATACACAATGAAAGTGTCGGAAAAATGTGACGTCTACAGTTACGGAGTAGTCCTTTTGGAGTTACTAACAGGCAAGAAGCCAATCCAATTGTGGGATCAAGGTGGTGGTGATCTTGTAACATGGGTGACAAATCATATCAACAAATATTCAATGAAACTAGACATTCTTGATGCTAAATTGGACCTACTACATGAAATTGATGTTGCACAAATATTCGATGTCTTAAAAATTGCTTTACTATGCACCGACACTTCTCCTTCTAGACGCCCAACTATGCGCAAAGTTGTCGCAATGCTTAAAAGTTCTAGTCAACGGAAAGAGCAATCTTCATTCTCTTCATGTCAAGAATAA 3270 0.3734 MERNVYALFVMLIFTLIFCLSEGLNAEGKYLMDIKMRLFDKYNHLNNWNSSNSTPCSWKGVTCNSDINPVVESLDLHAMNLSGSLSSSIGGLVHLLHLNLSQNTFSGFIPKEIGNCSSLQVLSLNINQFEGRIPVEIGRLSNLTELHLSNNQLSGPFPDEFGNLSSLSILTVYTNHLSGTLPSSIGKLKRLIKFRAGQNMISGSLPQEIGGCESLENLGLTQNRISGEIPKELGLLKNLQFLVLRENNLHGAIPKELGNCTNLEVLALYQNNLEESIPKELGNLVVLKRLYLYRNELKGNIPREIGNLSVAIEIDFSENLLTGKIPIELVNIKGLQLLHLFQNKLSGVIPNELTTLKNLTDLDLSINYLNGTIPIGFQDLTKLKSLQLFNNSLSGRIPYALGANSPLWVIDLSFNFLVGRIPVNLCQLSNLMMLNLGSNKLTGNIPYGITSCKSLVYLRLFGNNLRGKFPFDLCKLVNLSTVELDQNEFIGSIPPQIGNFKNLQRLHLSNNHFSSELPKEIGNLSQLVSFNVSSNYLFGRVPMELFKCRKLQRLDLSGNEFVGTLSGEIGNLLQLELLRLSHNNFSGNIPSEVGKLLRLTELQMSENSFYGYIPQELGSISSLQIALNLSYNKLAGQIPSKLGNLIMLESLQLNNNHLNGEIPNSFNRLLSLLSFNFSYNDLIGPSPSLPLFQNSTFSCFSGNKGLCGGHLIPCPNSPSHSHPNKLGKILAIAAAIVSGVSLVLILVVIYLMRNLTVPNQVIDKPNYPNVSNMYFFPKEELSFQDMVEATENFHSKYVIGKGGSGTVYRADISTDHTNMKTVAIKKLTSNSHSNSIDVNGCFRAEISTLGKIRHRNIVKLYGFCNHSGSSMIFYEYMEKGSLGELLHGASSSTLDWYSRFRIALGTAQGLSYLHHDCKPRIIHRDIKPNNILIDHEFEAHVGDFGLAKLIDISRSKSVSAVVGSFGYIAPEYAYTMKVSEKCDVYSYGVVLLELLTGKKPIQLWDQGGGDLVTWVTNHINKYSMKLDILDAKLDLLHEIDVAQIFDVLKIALLCTDTSPSRRPTMRKVVAMLKSSSQRKEQSSFSSCQE* 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1280 1089 Gene3D Ribonuclease Inhibitor 23 174 IPR032675 -
Mal1g1280 1089 Gene3D Ribonuclease Inhibitor 175 271 IPR032675 -
Mal1g1280 1089 Gene3D Phosphorylase Kinase; domain 1 760 876 - -
Mal1g1280 1089 SMART LRR_typ_2 140 163 IPR003591 -
Mal1g1280 1089 SMART LRR_typ_2 284 308 IPR003591 -
Mal1g1280 1089 SMART LRR_typ_2 380 404 IPR003591 -
Mal1g1280 1089 SMART LRR_typ_2 164 188 IPR003591 -
Mal1g1280 1089 SMART LRR_typ_2 356 379 IPR003591 -
Mal1g1280 1089 SMART LRR_typ_2 428 452 IPR003591 -
Mal1g1280 1089 SMART LRR_typ_2 645 668 IPR003591 -
Mal1g1280 1089 SMART LRR_typ_2 500 524 IPR003591 -
Mal1g1280 1089 SMART LRR_typ_2 572 596 IPR003591 -
Mal1g1280 1089 SMART LRR_typ_2 92 116 IPR003591 -
Mal1g1280 1089 SMART LRR_typ_2 236 260 IPR003591 -
Mal1g1280 1089 Gene3D Ribonuclease Inhibitor 377 722 IPR032675 -
Mal1g1280 1089 Pfam Protein kinase domain 794 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1280 1089 SMART serkin_6 793 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1280 1089 Gene3D Ribonuclease Inhibitor 272 376 IPR032675 -
Mal1g1280 1089 ProSiteProfiles Protein kinase domain profile. 793 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1280 1089 ProSitePatterns Serine/Threonine protein kinases active-site signature. 921 933 IPR008271 GO:0004672|GO:0006468
Mal1g1280 1089 PANTHER LRR RECEPTOR-LIKE KINASE 8 1082 - -
Mal1g1280 1089 ProSitePatterns Protein kinases ATP-binding region signature. 799 826 IPR017441 GO:0005524
Mal1g1280 1089 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 8 1082 - -
Mal1g1280 1089 SUPERFAMILY Protein kinase-like (PK-like) 771 1072 IPR011009 -
Mal1g1280 1089 Gene3D Transferase(Phosphotransferase) domain 1 877 1088 - -
Mal1g1280 1089 SUPERFAMILY RNI-like 73 416 - -
Mal1g1280 1089 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Mal1g1280 1089 SUPERFAMILY RNI-like 350 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1280 Mal-Chr1 16271352 16274895 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1280 49 1073 Receptor kinase-like Gene Family AT1G73080 38.647 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal1g1280 Pkinase 5.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1280 - - adu:107465566 1464.13