Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1279 ATGGAGAAAAATGTATCTGCATTATTTGTGATGTTGATATTTACTCTTATTTTCTCTATATCTGAAGGACTTAATGCAGAGGGAAAATACCTCATGGACATAAAAGTGAGATTGTTTGACAAATACAATCATCTTGAGAATTGGAATTCAAATGATTCCACACCCTGTGGTTGGAAAGGTGTCATCTGCAACAGTGACATCAATCCAATGGTGCAGTCTCTTGACTTGCATGCAATGAATCTCTCAGGCTCTTTATCTTCCAGCATTGGTGGTTTGGTCCACTTACTTCACCTTAATCTGTCACAAAACACTTTCTCTGGTTTTATACCAAAGGAAATTGGAAGCTGTTCAAGTTTGCAGGTTCTTAGTCTCAACATAAATCAGTTTGAAGGTCGAATTCCTGTCGAAATAGGCCGGCTTTCGAATTTAACCGAGTTGCATCTTTCCAACAACCAGCTCTCTGGAACTTTACCAGATGCAATTGGTAACCTTTCTTCACTCTCAATACTTACTCTTTACACCAATCATCTCAGTGGACCTTTGCCGCCTTCTATCGGGAACCTTAAAAGATTGATTCGGTTTCGAGCTGGACAGAATATGATCTCAGGAAGTCTACCTCAAGAAATAGGTGGATGTGAAAGCTTGGAGTATCTAGGTTTAACTCAAAATATGATAACTGGTGAAATACCAAAAGAGCTTGGTTTACTCAAGAACTTGCAATGTTTGGTCCTTAGGGAAAATAATCTCCATGGTGCTATACCTAAAGAGCTTGGAAACTGTACAAGTTTGGAGGTTCTTGCTCTCTATCAGAACAATCTTGTGGAAGAAATTCCGAAGGAACTTGGAAAACTTGAAGTCCTAAAGAGACTGTACCTTTACAGGAATGAGTTGACAGGAAATATTCCAAGGGAGATTGGAAACCTTTCTGTTGCAATTGAGATTGATTTTTCAGAGAATCTTCTTACAGGAGAGATACCGATCGAGTTGGTTAATATAAAAGGGTTGCAATTGCTCCATCTCTTTCAGAACAGGTTAACCGGCGCGATTCCAAATGAGTTGACAACCTTGAAAAACCTAACTGACCTTGACCTCTCTATCAATTATCTCAATGGTACTATTCCTATTGGATTTCAGGATTTAACCAAACTTAAGTCATTGCAACTCTTCAACAACTCATTAAGTGGTAGAATTCCTTATGCACTTGGAGCAAATAGTCCACTTTGGGTGATTGATTTGTCATTCAACTTTTTGGTTGGAAGAATTCCAATTCATCTTTGTCAACTATCTAACTTGATGATGTTGAACTTAGGATCAAACAAACTCGCCGGAAACATACCTTGTCAAATTACAAGCTGCAGGTCTTTGGTGTATCTTCGCCTCTTCGGCAACAACTTGAGGGGCAAGTTTCCTTCTAATTTATGCAACCTTGGAAACCTTTCTACAGTTGAGTTGGATCAAAATGAATTCTCAGGCCCTATTCCTCCACAAATTGGTAACTTCAAAAGTTTGCAAAGACTTCACCTTTCCAACAACCACTTTTCTTCTGAATTGCCAAAAGAAATCGGAAACCTCTCACAGTTGGTGTCCTTTAATGTCTCATCAAATTATCTTTTTGGTAGAGTGCCTATGGAACTTTTCAAATGCAGGAAGTTACAAAGACTTGACCTCAGCGGCAACGGCTTCACATGTACTTTATCAGGTGAGATAGGAACTCTTTCACAGTTAGAGCTTCTCAGGCTCTCAGATAACAACTTTTCTGGTAATATTCCCTTGGAAGTCGGAAAACTCTTGAGGTTAACCGAGCTACAAATGAGCGAAAACTCATTTGGTGGTTACATTCCACAAGAGTTAGGTTCACTCTCATCCTTGCAAATTGCACTTAATCTCAGCTATAATAAACTTTCAGGCCAAATACCCTCTAAACTTGGGAATCTTATTATGCTAGAATCCCTTCAACTCAATAACAACCATTTGAGTGGCGAAATTCCAAACTCTTTTAACAGTCTTTCAAGTTTACTTTCTTTCAATTTCTCATACAATGATCTTATAGGACCTTTACCCTTTTTACCTCTCTTTCAAAACTCAACATTCAGCTGCTTTTCGGGTAACAAAGGTCTCTGTGGAGGACACCTTATCCCTTGTCCAAATTCACCTTCACATTCACATCCAAATAAACTAGGAAAAATTCTTGCTATAGCTGCAGCAATTGTTAGTGGAATTTCATTGATTTTAATACTAGTTATTATATATCTCATGAGAAATCTCATTGTGCCACAACAAGTAATAGATAAACCAAATCCTCCAAATGTTTCAAACATGTACTTTTTTCCAAAAGAGGAGTTGACTTTCCAAGACATGATTGAAGCTACTGAAAATTTTCATTCCAAATATGAAATTGGAAAAGGTGGTAGTGGAACTGTGTATAGAGCAGATATATCAACTGATCATACAAATATGAATTCAATTGCTATAAAGAAGCTGACATCAAACAGTCGCAACAACAGCATCGATGTAAATGGCTGCTTCCGCGCTGAAATCTCAACTTTAGGAAAAATAAGGCATAGAAATATTGTGAAGTTATATGGTTTCTGCAACCATAGTGGCTCAAGTATGCTATTTTATGAGTACATGGAAAATGGTAGTTTGGGGGAGTTACTTCATGGAGAATCTTCCTCTAGTCTTGATTGGTATTCCAGGTTTAGGATTGCACTTGGAACTGCACAAGGACTCTCCTATTTGCACCATGATTGCAAGCCTAGGATTATCCACCGTGATATCAAGTCCAATAACATACTTATTGACCATGAATTTGAAGCTCATGTTGGTGATTTTGGTTTGGCTAAGCTAATTGATATCTCAAGGTCTAAATCAATGTCTGCTGTTGTTGGTTCTTATGGCTACATTGCCCCTGAGTATGCATACACAATGAAAGTCACAGAAAAATGTGATGTCTACAGTTACGGAGTAGTCCTATTGGAGTTACTTACAGGAAAGAAGCCAGTCCAATCGTTGGATCAAGGTGGTGGTGATCTTGTAACATGGGTGACAAATAATATCAACAAATATTCATTGAAACTAGACAACATCCTTGATGCTAGATTGGACCTACTACATGAAATTGATGTTGCTCAAATATTTGATGTCTTGAAAATTGCTTTACTATGCACCGACACTTCTCCTTCTAGACGACCAACAATGCGTAAAGTTGTTGCAATGCTTACAAGTTCTAGTCAACGGAAAGAGCAATCTTTGTTATCTCCATGTCAAGAATCAAGTAACATAGAAGAATATTGA 3294 0.3795 MEKNVSALFVMLIFTLIFSISEGLNAEGKYLMDIKVRLFDKYNHLENWNSNDSTPCGWKGVICNSDINPMVQSLDLHAMNLSGSLSSSIGGLVHLLHLNLSQNTFSGFIPKEIGSCSSLQVLSLNINQFEGRIPVEIGRLSNLTELHLSNNQLSGTLPDAIGNLSSLSILTLYTNHLSGPLPPSIGNLKRLIRFRAGQNMISGSLPQEIGGCESLEYLGLTQNMITGEIPKELGLLKNLQCLVLRENNLHGAIPKELGNCTSLEVLALYQNNLVEEIPKELGKLEVLKRLYLYRNELTGNIPREIGNLSVAIEIDFSENLLTGEIPIELVNIKGLQLLHLFQNRLTGAIPNELTTLKNLTDLDLSINYLNGTIPIGFQDLTKLKSLQLFNNSLSGRIPYALGANSPLWVIDLSFNFLVGRIPIHLCQLSNLMMLNLGSNKLAGNIPCQITSCRSLVYLRLFGNNLRGKFPSNLCNLGNLSTVELDQNEFSGPIPPQIGNFKSLQRLHLSNNHFSSELPKEIGNLSQLVSFNVSSNYLFGRVPMELFKCRKLQRLDLSGNGFTCTLSGEIGTLSQLELLRLSDNNFSGNIPLEVGKLLRLTELQMSENSFGGYIPQELGSLSSLQIALNLSYNKLSGQIPSKLGNLIMLESLQLNNNHLSGEIPNSFNSLSSLLSFNFSYNDLIGPLPFLPLFQNSTFSCFSGNKGLCGGHLIPCPNSPSHSHPNKLGKILAIAAAIVSGISLILILVIIYLMRNLIVPQQVIDKPNPPNVSNMYFFPKEELTFQDMIEATENFHSKYEIGKGGSGTVYRADISTDHTNMNSIAIKKLTSNSRNNSIDVNGCFRAEISTLGKIRHRNIVKLYGFCNHSGSSMLFYEYMENGSLGELLHGESSSSLDWYSRFRIALGTAQGLSYLHHDCKPRIIHRDIKSNNILIDHEFEAHVGDFGLAKLIDISRSKSMSAVVGSYGYIAPEYAYTMKVTEKCDVYSYGVVLLELLTGKKPVQSLDQGGGDLVTWVTNNINKYSLKLDNILDARLDLLHEIDVAQIFDVLKIALLCTDTSPSRRPTMRKVVAMLTSSSQRKEQSLLSPCQESSNIEEY* 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1279 1097 Gene3D Ribonuclease Inhibitor 23 174 IPR032675 -
Mal1g1279 1097 SMART LRR_typ_2 284 308 IPR003591 -
Mal1g1279 1097 SMART LRR_typ_2 380 404 IPR003591 -
Mal1g1279 1097 SMART LRR_typ_2 356 379 IPR003591 -
Mal1g1279 1097 SMART LRR_typ_2 645 668 IPR003591 -
Mal1g1279 1097 SMART LRR_typ_2 500 524 IPR003591 -
Mal1g1279 1097 SMART LRR_typ_2 140 163 IPR003591 -
Mal1g1279 1097 SMART LRR_typ_2 572 596 IPR003591 -
Mal1g1279 1097 SMART LRR_typ_2 164 188 IPR003591 -
Mal1g1279 1097 SMART LRR_typ_2 92 116 IPR003591 -
Mal1g1279 1097 SMART LRR_typ_2 236 260 IPR003591 -
Mal1g1279 1097 SMART LRR_typ_2 428 452 IPR003591 -
Mal1g1279 1097 PANTHER LRR RECEPTOR-LIKE KINASE 9 1085 - -
Mal1g1279 1097 SUPERFAMILY RNI-like 73 416 - -
Mal1g1279 1097 Gene3D Transferase(Phosphotransferase) domain 1 877 1094 - -
Mal1g1279 1097 ProSiteProfiles Protein kinase domain profile. 793 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1279 1097 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Mal1g1279 1097 SMART serkin_6 793 1073 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1279 1097 ProSitePatterns Serine/Threonine protein kinases active-site signature. 921 933 IPR008271 GO:0004672|GO:0006468
Mal1g1279 1097 ProSitePatterns Protein kinases ATP-binding region signature. 799 826 IPR017441 GO:0005524
Mal1g1279 1097 Gene3D Phosphorylase Kinase; domain 1 762 876 - -
Mal1g1279 1097 SUPERFAMILY RNI-like 314 685 - -
Mal1g1279 1097 Pfam Protein kinase domain 793 1070 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1279 1097 Gene3D Ribonuclease Inhibitor 175 423 IPR032675 -
Mal1g1279 1097 Gene3D Ribonuclease Inhibitor 424 718 IPR032675 -
Mal1g1279 1097 SUPERFAMILY Protein kinase-like (PK-like) 767 1073 IPR011009 -
Mal1g1279 1097 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 9 1085 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1279 Mal-Chr1 16263896 16267977 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1279 49 1073 Receptor kinase-like Gene Family AT1G73080 38.095 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal1g1279 Pkinase 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1279 - - adu:107465566 1442.94