Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1272 ATGAACTGCTTTCCGTGTTGTGGCCATCAGAAAAATAAGAATAGCAATAGTAAGAGAGAGCATGGTTCTCCCACACAACAGGAAATCACTTCTGCATCCAAAGCACCAGATATGAAGAAACAAAGGGCAGATGAGCAAATCCAAGGAGATCCAACAAACATTAATGCACAAAATTTCACTTTTCGCGAGCTAGCAACAGCGACAAAGAATTTCCGACAGGAATGTCTCCTTAGTGAAGGAGGCTTTGGCAGAGTTTATAAAGGGACTATTCCAGCAACTGGACAGGCTGTGGCTGTGAAGCAACTCGATCGACATGGGACCGAAAACAGCAAGGATTTTCTGGCAGAAGTTTCTCTGTTGAGTCATGTTCACCATGAAAATCTTGTCAATCTCATTGGTTATTGTGCTGATGGTGATCAACGTCTTTTGGTTTATGAATACTTTCCTGGCACTACTCTTGAAGACCGTCTTCTTGCAGAGAACAAAACGGAAGAACCACCATTAAATTGGTTTGATAGAATGAAAGTGGCAGCAGGTGCATCTAAAGGACTAGAGTACTTGCATGACATTGCTAATCCACCAATTATATACCGTGACTTCAAAGCATTCAACATATTGTTGGATGTTGATCTTAATGCAAAACTAAACGATTTTGGAATGGTCAAACTTTCTGGTGGAGACAAGATGAACCATGCACCTCCAAGAGTTATGGGTACATATGGTTATTGTGCTCCTGAATATACAAGAACAGGTCAATTCTCCTTGAAATCAGATGTATACAGTTTTGGAGTTGTCTTGCTCGAACTTATCACTGGACGACGTGCCATTGACACCACAAGGCCTAACGAAGAGCAAAATCTTGTTTCATGGGCACAACCCTTATTTAGGGACCCAAAGAAATATCCAGATATGGCAGATCCACTTCTCAACAAACAATTCCCAGAAAAGGATCTTAATCAAGCTGTTGCAATAGCAGCCATGTGCTTACAAGAGGAACCGGAAGCTCGTCCTTTGATCGGTGACGTTGTAACCGCTCTGAGTTTTCTTTCCACGGTTCCAACGCAACCTATTCCACCACCTTCACTCCCCAATGCGATCTCAGTCTCTAATCATAGTGTTGCTACCGAAAGCGAATGGGAAAGTGAGAGTGAAAGTGAATTAGAAGAAGAAACTTCGGATGATGAAGGCACTGATCAGGAAGAAGAAAATGAAACTGCTCGACATCATGCTGCAGCCAGTGCAAAATACCAAGAAAGTGGTGTATTAAGCCAACCTCAACGAAGGGTGTCTTCAAAGAAATCAAGCCGAAAAAGCAGCACAAGATCAAGGAAAGAAACAATCAGTACAGATTCAGCAGATGGAAGTGCTTCTTCCAGTGACCGAAGCAGTAGAAAATGGCAAAGCTTTGTTGGTACTTTAAGCCAAAAGACAAACAGCACAAGAAAGTCTTCTATCAGAGAAAAAAGCCAGAAAAGCAGCAAAAAAACTTCAATCAAAGAACTAAGCCAAAAAAGCAGTAGAAAATCTTCCATCAGAGATTTAATCCATAAGAGCAGTGGAAAGTCTTCTGCTAGAGTTTCAAACCGCATGGAATCGGAAGATGGAAGCATGATTTCGTCTCATAGAACTGCCTCATCAAGCCAATATACAAGCAGCGCTATGTCTGACCGTAGTAGCAGCAGAGGAAGTGGGAGTGTTCACTCGGACATTAACCATAGCAGAAGGACAGAAGAGAGCATGAGATTAGCCATGGAATCTGATGATGACGGAATCAGTCATCCTTTCGATCGTATGAGTAGCAGTGAATCAGATCGGCTATGA 1821 0.4223 MNCFPCCGHQKNKNSNSKREHGSPTQQEITSASKAPDMKKQRADEQIQGDPTNINAQNFTFRELATATKNFRQECLLSEGGFGRVYKGTIPATGQAVAVKQLDRHGTENSKDFLAEVSLLSHVHHENLVNLIGYCADGDQRLLVYEYFPGTTLEDRLLAENKTEEPPLNWFDRMKVAAGASKGLEYLHDIANPPIIYRDFKAFNILLDVDLNAKLNDFGMVKLSGGDKMNHAPPRVMGTYGYCAPEYTRTGQFSLKSDVYSFGVVLLELITGRRAIDTTRPNEEQNLVSWAQPLFRDPKKYPDMADPLLNKQFPEKDLNQAVAIAAMCLQEEPEARPLIGDVVTALSFLSTVPTQPIPPPSLPNAISVSNHSVATESEWESESESELEEETSDDEGTDQEEENETARHHAAASAKYQESGVLSQPQRRVSSKKSSRKSSTRSRKETISTDSADGSASSSDRSSRKWQSFVGTLSQKTNSTRKSSIREKSQKSSKKTSIKELSQKSSRKSSIRDLIHKSSGKSSARVSNRMESEDGSMISSHRTASSSQYTSSAMSDRSSSRGSGSVHSDINHSRRTEESMRLAMESDDDGISHPFDRMSSSESDRL* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1272 606 ProSiteProfiles Protein kinase domain profile. 71 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1272 606 MobiDBLite consensus disorder prediction 358 606 - -
Mal1g1272 606 MobiDBLite consensus disorder prediction 449 480 - -
Mal1g1272 606 PANTHER RECEPTOR-LIKE KINASE LIP1 1 574 - -
Mal1g1272 606 MobiDBLite consensus disorder prediction 568 606 - -
Mal1g1272 606 Gene3D Transferase(Phosphotransferase) domain 1 149 354 - -
Mal1g1272 606 MobiDBLite consensus disorder prediction 19 34 - -
Mal1g1272 606 MobiDBLite consensus disorder prediction 379 400 - -
Mal1g1272 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Mal1g1272 606 MobiDBLite consensus disorder prediction 520 567 - -
Mal1g1272 606 MobiDBLite consensus disorder prediction 10 53 - -
Mal1g1272 606 Gene3D Phosphorylase Kinase; domain 1 40 147 - -
Mal1g1272 606 MobiDBLite consensus disorder prediction 481 519 - -
Mal1g1272 606 SUPERFAMILY Protein kinase-like (PK-like) 57 382 IPR011009 -
Mal1g1272 606 PANTHER OS07G0668900 PROTEIN 1 574 - -
Mal1g1272 606 Pfam Protein kinase domain 76 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1272 Mal-Chr1 16203719 16206721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1272 1 378 Glycoside Hydrolase AT3G07070 57.614 4.25e-154 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mal1g1272 Pkinase 4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1272 - - gmx:100804526 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1272 1 16203719 16206721 Mal1g1272 1 16203719 16206721 ECH