Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1245 ATGTATGCTTCTGCTAATGGTTGCCTTGTGGCAACTGGAGGAGGTGCAGAACTTGAAGTTGAAGCTGAAGTTCAAGGACATGTTGCAGAGGAAGAACAAGTCCATGTGCAAAATGATGCAAATGCAATGCTGAAAAATGTGGAAATTCTAAGGGCTAGGAAAGGAAAGATGCCAATGAACTATTCTGAAAGAGCGCATGTCGAAGAAGCAACTATGGCTGATGATGAAGCAAAAATTGTACCAATTGATGATCAAGTTCCAAATAAACCTTCAAGTGATGAAGCAAGTGCCGTTGGAGGATTAATGTTGCTTCAACATGATGTTGGTGCTAGTGGATCTTGTCCGCAAAGAAAGAGAAAGAGGGACTTTTCTGAATATGATAAACCACCTTGTCCTATGATGAGTGATGGAAAAAAAATAGTGCTCCGAGTTGAAAGCGAAGAAGACATTTTGGATGATGGTTATTGCTGGCGTAAGTATGGATGCAAAGAGATCAAAGGAAATCCTAATAATCCTAGGGGGTACTATAGGTGCTCAACACCAAGCTGTAATATCAAAAAACAAGTAGAAAGGGATGGAAAAGATCCTAAGTATTTACTTGTTTCATATGAAGGCAAACATAACCATGACTTGCCTAGCAACGATCAAAAAAAGAAAACGTACTTAAGAAGTACTAATGCTGCTGCAGTACGTAGAAATGTCGGCATGATACCACCATTTCCATTGCCTATGGTTCACCCTCTCCCTTCTTTTCATCACTATGAAAATTCTGGATTCCTCCATGGTTATGGACCTTATGGCATGAACTACGTCTGGCCAAATAATAATCCTTTCCTCAACATGTCGAGTAATACCATGATGCGGCCCTATAGACCGGTTAATGAACAAAATTTTCTAGGATGCTATGCTTCTGCTCCTATTGCTATTGCTACCACTCAAGCTAGACCTAATATCGGTGGGTCAGTTCCATTTCCTCAATTTCCGATTTCACCACCACTACCATTATTTCCTACTGTACCATATGGTGGTAATTTTTTTCAGGCTAGTGGGTATAGTAATGCTGCTGCTCCGGTCATTCCTTTGAGGGGAACTGCACCAACTGATCAGGAACCTAGGGACGTTCGTGACAATGAATGA 1137 0.4099 MYASANGCLVATGGGAELEVEAEVQGHVAEEEQVHVQNDANAMLKNVEILRARKGKMPMNYSERAHVEEATMADDEAKIVPIDDQVPNKPSSDEASAVGGLMLLQHDVGASGSCPQRKRKRDFSEYDKPPCPMMSDGKKIVLRVESEEDILDDGYCWRKYGCKEIKGNPNNPRGYYRCSTPSCNIKKQVERDGKDPKYLLVSYEGKHNHDLPSNDQKKKTYLRSTNAAAVRRNVGMIPPFPLPMVHPLPSFHHYENSGFLHGYGPYGMNYVWPNNNPFLNMSSNTMMRPYRPVNEQNFLGCYASAPIAIATTQARPNIGGSVPFPQFPISPPLPLFPTVPYGGNFFQASGYSNAAAPVIPLRGTAPTDQEPRDVRDNE* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1245 378 MobiDBLite consensus disorder prediction 113 127 - -
Mal1g1245 378 SUPERFAMILY WRKY DNA-binding domain 145 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal1g1245 378 SMART WRKY_cls 151 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal1g1245 378 Pfam WRKY DNA -binding domain 152 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal1g1245 378 Gene3D WRKY domain 136 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal1g1245 378 MobiDBLite consensus disorder prediction 110 130 - -
Mal1g1245 378 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 16 212 IPR044810 GO:0003700
Mal1g1245 378 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 16 212 - -
Mal1g1245 378 ProSiteProfiles WRKY domain profile. 146 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1245 Mal-Chr1 15755365 15757351 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1245 152 217 WRKY Transcription Factor Family AT1G13960 48.485 4.22e-14 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal1g1245 WRKY 3.4e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1245 - K18835 mtr:MTR_1g078260 442.58