Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1241 ATGGATAAGGAAAAGGCTCGTATTAACATTGTGGTTATTGGTCATGTTGACGCTGGGAAGTCAACCACTACTGGTCATTTGATCTACAAGCTTGGAGGTATTGACATGAGTGCCATTGAGAAAGAAGCTCTTGAGATAAACAAGTATGCTTGGGTGCTTGACAAGCTCAAGGCTGAGCGTGATAGAAATACGACAATTGACATTTCTATGCATAAGTTTGAGACAAACAACTACAACTGCACTGTCATTGATACCCCCGGACACAGGAATTACATTAAGAACATGATCAACGGGACGTCCCAAGCTGACTGTGCTTTGCTCATCATTGATTCCACTACTGATGATTTTGAAGCTGATATGAGTGGTCAGACCTTTGAACATGCTCTTCTTGCCTTCACTCTTGGTGTGAATCAAATTATCTGCTGCTGCAACAAGATGGATGCCGCTACACCCAAATACTTCTTCAGATGGATGCATCTTTAG 483 0.4224 MDKEKARINIVVIGHVDAGKSTTTGHLIYKLGGIDMSAIEKEALEINKYAWVLDKLKAERDRNTTIDISMHKFETNNYNCTVIDTPGHRNYIKNMINGTSQADCALLIIDSTTDDFEADMSGQTFEHALLAFTLGVNQIICCCNKMDAATPKYFFRWMHL* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1241 160 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 153 IPR027417 -
Mal1g1241 160 PRINTS GTP-binding elongation factor signature 139 148 IPR000795 GO:0003924|GO:0005525
Mal1g1241 160 PRINTS GTP-binding elongation factor signature 81 91 IPR000795 GO:0003924|GO:0005525
Mal1g1241 160 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Mal1g1241 160 PRINTS GTP-binding elongation factor signature 61 69 IPR000795 GO:0003924|GO:0005525
Mal1g1241 160 PRINTS GTP-binding elongation factor signature 97 108 IPR000795 GO:0003924|GO:0005525
Mal1g1241 160 PANTHER TRANSLATION FACTOR 1 154 - -
Mal1g1241 160 PANTHER ELONGATION FACTOR 1-ALPHA 1-RELATED 1 154 - -
Mal1g1241 160 Pfam Elongation factor Tu GTP binding domain 7 150 IPR000795 GO:0003924|GO:0005525
Mal1g1241 160 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 160 IPR000795 GO:0003924|GO:0005525
Mal1g1241 160 Gene3D - 1 155 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1241 Mal-Chr1 15711734 15712304 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1241 1 153 Eukaryotic Initiation Factors Gene Family AT1G07930 75.309 3.06e-80 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1241 K03231 - smo:SELMODRAFT_270693 239.58