Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1228 ATGAAAGGGCGATCCAATCGCCCGATGGATCCACCGCCGGACGAATGGGTCGACGGTTCATGGACGGTGGACTGCATCTGCGGCGTCACGTTCGACGACGGCGAAGAGATGGTGAAGTGTGACGAATGCGATGTATGGGTTCACACGCGTTGTTCTCGTTATGTCAAAGGTGATGACATGTTTGCTTGCGATAAATGCAAAGCGAAAAACAACCGTGCCGGAATGGAGAATAATACGGAGGAGACTGAGGTTGCACAGTTTCTTGTGGAGCTTCCGACGAAGACGATTGCGTTGGAGAGAAGGGGGAATAGTAGTAGAAGTAATGGAATTGCTTCTTCTAGGGTTGGGTCGTGTTCGCGACGGCCGTTTAAGCTTTGGACTGATATACCTATGGAGGAGAGGGTTCATGTACAGGGTGTACCTGGTGGGGAGCCTGAGTTGTTTGTGGGGAAGACGGTGTCGTCGATTTTCGGTCCGCAGTTGTGGAAATGTACTGGGTATGTTCCTAAGAAGTTTAGTTTTCAGTATAGGGAGTTTCCTTCTTGGTATGAGAATGATGATAAGGATAAGGATAATGGTGCACAAGAAAATGATAGTGATATTAAGGCTAAGGATAATGGTGCTGGGGTGCTTTTATCGTTGTCGAAAGAGGGTAATAATGTGTTGGCTACGTCACCTGTTGCGGCTTTGGTTGGTATGGGATCGAGGCAGGGTAAGAAAGGGTTTAAGGAAAGTGGGATGGGTAAGTTTGGGAGAGATCATATGCCACATGTCCATAATGCGGTTAAGAAGGAGAGGACTTTGCTTAGGCCTTTTGTTCATTCGAGTAAGCGTAGGAAGGATGAAATCTCGAAAGACCGGAGTGGGAAGAAGAAGCGGGTTAAGACTTCTGATAGAGAGGAGGTGGATACCAAGAGGAGGACTTCTGATAGAGAGGATGTTGATCCCAAGAGGAGGACTTCTGACAAAGAGGATGTAGATCACAAGAGGAGAACTTCACATTCTTCTAAAGCAGCATTTACACCTACCAGTGATGCAAAACAATTGGCATTTTATGGAGACAGAGGTCCGAAGGTTTTCAAGGGAGACATTCGGAGCATAAAGAATAAAAATTTAAAAGACACAGTGGTTCAAGATCATATTTCTTCTTTTGCCGTGGGTACCACCATGGAGGTATCAAATAACAACTTGACGACTACCGAGGAGTCTTCAGAAGCGTTATATCCTAAGAAAACAAGACGCAGTCATTCTGCTGGAGATGTATTAGCAGAAGAGAAGATTGGCCATAAAGTTCTTGAAATGTCGTCTAAGACTGATGATGCCGTTACATCAGTTCTAAAGCATACTTATCTTGAAAATGCCCCAGCTAAAAAGAAGGGCGGAGATTGCTTGGAAGCTAATAATGTGGATGAAACTTTAGTATTAAGAAGCCCTATGAGTCCTCAGACAGAAGATCATTCTGGTTCTGCACCAGAACGTATGGAAAAGCAAGTTTCTCAAGATATTGACTGTAACCAGCATCCAAGCTATGGACAATGCAAAGTTAAGGTGAAGAGAGAAGATGGCAAAGATAAGTTTACGCTCTCAAATTTTCATTCTTCATCTATCAGCGATCTTAAAAACAACGGAAAGTCATCTGATCCCACATCTGATATTGATAAAGTGAATGACTCTGCAGTTCTCAGTTTACCTTTATGTGAAAATAAGGTGGGCGATGTTGGGTTATCATCAGCAGTTGTCCCTGATAGTCATACCAATGAACTTAATGAATTACCTGGTAAAACTTCTCATGGAAAAGAAGTTGAGGGATCTGAAGGTTCCTTTGAAACACAAAAGGGGTTATCAGAAACAAAAGATGGTTTGGACTTTACTAAGAACCCATCAAAATCTGAAGCACTTGAATGTCAAAGTCTAATGCTAGCTTCTGTCGGAAAGGCGTCTCCAACTTCATCAATCATGAACTCCAAATCATTGAGCCATGACTTCAAATCTGAAGATACCGAAACTGCTAATCCTTTTACGAAGCATGGAGCTAAAGCTGACCGTAACTTTCACATAAAGAATGAAAGTTGTACAAATGATGCTGCAACGGATGAATTTCCAAGGAAGTTTGTAAGAGAGCGTCCAAGATCCTCTTCAAAATCCTCTTTACATTCTAGCCGGAGTACGCAAAATTCTGTTTCAAAGCAAGTAGCAAATCCAGATGCGAGAGATTCTGTTCATTGTTCGTTATCTAAACCATCCCTGGGTCACCAGACTCCAAGTGTTGTTGGCTCTAGTGAGACCAATGCATCGATGCACCATCAAAAAGGATTGCAAGTGCAGAATAAAACTTCATCTTCATTGCCACAGAAAGCAGAAAGGCTTAATCAAACAAATACTCATCCTTCCTCTAAGTTGAACCAGAGCCACACACCATCGTTGAATCCTTCTCCAACATTAAATTCTTCAATGCTGAGTGATGAAGAGTTAGCTTTGCTATTGCATCAAGAACTGAATAGTTCACCTCGCGTACCACGGGTACCCCGGGCACGCCAAACGGGTAGCTTGCCACAGTTGACTTCTACCAGTGCTACAAACATTCTAATGAAGCGAGCATCAGTTGGAGGAAAGGATAACTATTTGGTATCTAAAAGAAAATACAAGGATGCAACTAGAGATGGGTTTTGCAGTTCTCGTGAACCAGAAGATGAAACTAAAAGGATAGAGAAGGAGAAGGGTCAATCATCATCTGATCAGAGAAAACAAGACACGGCGTATGTGGAAGGTGCTTCTGTAAAGGAAGAAGGAGGCCGCACATGTGTGACAGCTGCAAACTCTATTACAAGCAATGTTGTTTCCACAACCCCTGCCATTGCAAACAGCGGTTCACCTTCCCCCCGTGAGGATCGTAATTTGTCATCAATGAGGAACTCACCGAGGAACATATCTGATGATGATGCAGCAACTGCTGGAAGGCCAGTTCATCACACCTTACCTGGCTTAATCAATGAGATAATGAGCAAGGGAAGGCGCATGACATATGAGGAACTCTGTAGTGCTGTGCTACCGCACTGGCCCAACTTGAGGAAACATAACGGAGAGCGATATGCATATGCAAGTCCCTCCCAAGCTGTTCTTGATTGTTTGAGGAACCGACATGAATGGGCAAGGTTGGTTGATCGCGGTCCAAAGACAAATACTAGGAAAAGGCGTAGTAAGCTGGATGCTGAAGAATCTGAAGATAATGGACATGACAAAAGTAAAACTGCAAAAGAGACCGAAGGGAAGAACTTTGAGTTGCAAAAAGAAGAGTTCCCTAAAGGTAAGCGTAAAGCTCGAAAACGCAGGCGGCTGGCTCTTCAGGGAAGAGCAGTAAAGGATGTCAGGAGGAGACAAAAAGCTGACTCACTAACCGGTGAGGATGTCGGTCCATCCACCAATTCTAGTGAAGAGAGCTTGTTTAGTGAGGATGAAATTCAAGCTGACAGAATATGTCGAGCAGGAACTACATCAGATGAGACAGGGAGTGCTTAA 3516 0.4377 MKGRSNRPMDPPPDEWVDGSWTVDCICGVTFDDGEEMVKCDECDVWVHTRCSRYVKGDDMFACDKCKAKNNRAGMENNTEETEVAQFLVELPTKTIALERRGNSSRSNGIASSRVGSCSRRPFKLWTDIPMEERVHVQGVPGGEPELFVGKTVSSIFGPQLWKCTGYVPKKFSFQYREFPSWYENDDKDKDNGAQENDSDIKAKDNGAGVLLSLSKEGNNVLATSPVAALVGMGSRQGKKGFKESGMGKFGRDHMPHVHNAVKKERTLLRPFVHSSKRRKDEISKDRSGKKKRVKTSDREEVDTKRRTSDREDVDPKRRTSDKEDVDHKRRTSHSSKAAFTPTSDAKQLAFYGDRGPKVFKGDIRSIKNKNLKDTVVQDHISSFAVGTTMEVSNNNLTTTEESSEALYPKKTRRSHSAGDVLAEEKIGHKVLEMSSKTDDAVTSVLKHTYLENAPAKKKGGDCLEANNVDETLVLRSPMSPQTEDHSGSAPERMEKQVSQDIDCNQHPSYGQCKVKVKREDGKDKFTLSNFHSSSISDLKNNGKSSDPTSDIDKVNDSAVLSLPLCENKVGDVGLSSAVVPDSHTNELNELPGKTSHGKEVEGSEGSFETQKGLSETKDGLDFTKNPSKSEALECQSLMLASVGKASPTSSIMNSKSLSHDFKSEDTETANPFTKHGAKADRNFHIKNESCTNDAATDEFPRKFVRERPRSSSKSSLHSSRSTQNSVSKQVANPDARDSVHCSLSKPSLGHQTPSVVGSSETNASMHHQKGLQVQNKTSSSLPQKAERLNQTNTHPSSKLNQSHTPSLNPSPTLNSSMLSDEELALLLHQELNSSPRVPRVPRARQTGSLPQLTSTSATNILMKRASVGGKDNYLVSKRKYKDATRDGFCSSREPEDETKRIEKEKGQSSSDQRKQDTAYVEGASVKEEGGRTCVTAANSITSNVVSTTPAIANSGSPSPREDRNLSSMRNSPRNISDDDAATAGRPVHHTLPGLINEIMSKGRRMTYEELCSAVLPHWPNLRKHNGERYAYASPSQAVLDCLRNRHEWARLVDRGPKTNTRKRRSKLDAEESEDNGHDKSKTAKETEGKNFELQKEEFPKGKRKARKRRRLALQGRAVKDVRRRQKADSLTGEDVGPSTNSSEESLFSEDEIQADRICRAGTTSDETGSA* 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1228 1171 MobiDBLite consensus disorder prediction 700 714 - -
Mal1g1228 1171 ProSitePatterns Zinc finger PHD-type signature. 25 66 IPR019786 -
Mal1g1228 1171 MobiDBLite consensus disorder prediction 645 681 - -
Mal1g1228 1171 MobiDBLite consensus disorder prediction 1054 1171 - -
Mal1g1228 1171 MobiDBLite consensus disorder prediction 242 334 - -
Mal1g1228 1171 MobiDBLite consensus disorder prediction 835 856 - -
Mal1g1228 1171 MobiDBLite consensus disorder prediction 700 816 - -
Mal1g1228 1171 MobiDBLite consensus disorder prediction 883 912 - -
Mal1g1228 1171 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 74 IPR013083 -
Mal1g1228 1171 MobiDBLite consensus disorder prediction 1115 1131 - -
Mal1g1228 1171 MobiDBLite consensus disorder prediction 527 553 - -
Mal1g1228 1171 MobiDBLite consensus disorder prediction 745 816 - -
Mal1g1228 1171 MobiDBLite consensus disorder prediction 948 988 - -
Mal1g1228 1171 MobiDBLite consensus disorder prediction 478 506 - -
Mal1g1228 1171 MobiDBLite consensus disorder prediction 948 978 - -
Mal1g1228 1171 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SET-26-RELATED 1 1167 - -
Mal1g1228 1171 MobiDBLite consensus disorder prediction 528 553 - -
Mal1g1228 1171 MobiDBLite consensus disorder prediction 583 628 - -
Mal1g1228 1171 SMART PHD_3 24 67 IPR001965 -
Mal1g1228 1171 MobiDBLite consensus disorder prediction 715 733 - -
Mal1g1228 1171 PANTHER UNCHARACTERIZED 1 1167 - -
Mal1g1228 1171 MobiDBLite consensus disorder prediction 1133 1148 - -
Mal1g1228 1171 SUPERFAMILY FYVE/PHD zinc finger 14 71 IPR011011 -
Mal1g1228 1171 MobiDBLite consensus disorder prediction 237 342 - -
Mal1g1228 1171 MobiDBLite consensus disorder prediction 1054 1101 - -
Mal1g1228 1171 MobiDBLite consensus disorder prediction 883 925 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1228 23 66 PHD Transcription Factor Family AT5G22260 44.681 8.10e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1228 - - gmx:100810855 1390.94