Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1222 ATGGGTTCAGGAAGCAGAAGCTACTCAGCGAATCCTCAAGATTACAAGCTTCTAGAAGAAGTCGGTTACGGTGCAAGCGCAACGGTTTATCACGCAGTTTATCTTCCATACAACGAAGAAGTTGCGGTGAAATCTCTCGATCTAGATCGATGCAATTCCAATTTCGATGATATACGCAAAGAAGCACAGATCATGAGCTTAATCGATCACAGAAACGTTGTGAAATCGTATTGTTCGTTCGTTGTGGATCGTAAACTTTGGGTGATTATGCCTTTTATGGCGCAGGGTTCTTGTTTGCATTTGATGAAATCAGCTTATCCTGATGGATTTGAAGAAGATGCTATTGGATCGATTTTGAAAGAGACGTTGAAAGCTTTGGATTATCTTCATCAACATGGACACATTCATCGTGATGTTAAAGCTGGTAATATTTTGCTTGATGCTAATGGTGAAGTCAAACTTTCGGATTTTGGTGTTTCTGCTTCTATGTTTGATACTGGTGATCGTCAGCGTTCTAGAAATACTTTCGTCGGTACTCCTTGCTGGATGGCTCCGGAGGTGCTGCAACCTGGTACTGGTTATAATTTTAAGGCTGATATTTGGTCTTTTGGAATTACGGCACTTGAGTTGGCTCATGGTCATGCGCCTTTTTCGAAGTATCCTCCAATGAAGGTGTTACTTATGACCATACAGAATGCACCTCCTGGCCTTGATTACGATCGTGATAGAAAGTTCTCGAAGTTGTGA 747 0.4163 MGSGSRSYSANPQDYKLLEEVGYGASATVYHAVYLPYNEEVAVKSLDLDRCNSNFDDIRKEAQIMSLIDHRNVVKSYCSFVVDRKLWVIMPFMAQGSCLHLMKSAYPDGFEEDAIGSILKETLKALDYLHQHGHIHRDVKAGNILLDANGEVKLSDFGVSASMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKL* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1222 248 Pfam Protein kinase domain 15 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1222 248 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 4 247 - -
Mal1g1222 248 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Mal1g1222 248 ProSiteProfiles Protein kinase domain profile. 15 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1222 248 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Mal1g1222 248 SUPERFAMILY Protein kinase-like (PK-like) 13 234 IPR011009 -
Mal1g1222 248 PIRSF ILK 4 237 - -
Mal1g1222 248 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 4 247 - -
Mal1g1222 248 SMART serkin_6 15 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1222 248 Gene3D Transferase(Phosphotransferase) domain 1 96 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1222 Mal-Chr1 15386954 15389146 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1222 8 247 MAP Kinase Kinase Kinase Kinase AT4G10730 83.750 1.60e-156 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Mal1g1222 Pkinase 4.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1222 - - gmx:100811264 464.922