Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1220 ATGCTTGGGGTATACCCACTCCAACAAATTCACAAGTCTATACCAAATGGTCCAAATTTCACAACTTCACCCTTGGAGACTCACTATAATCAAAAGATTCATATATCTGTTGGAGGAATTGGAAATGTTGATGCTGATGCTAATAGTCCAAGTTCTTCATTGCCTGCAACTGCACCCTCTTCTCAAACAGTGTTTGGAAACATTCCAATAGCTCCTTCTTCATCAAATTCACCTCACCTAACTTCAACTTTTCACGTGTTCATGATTGGATCTCTCATATATGCACTATTTTTGGCTTTAATAAATATAGAGATCGCGGTCTTAGATCAAATAGCTTCTTCATATAGGTCTGTGAGGGAGCCGAGAAAGATCATAATAACAACTAGCGAAGTCGATCTCTTAGACGATGGTTATGTTTGGAGAAAGTACGGGCAACATGTTGTCAGAGGAAACCCTAATCCTAGGAGCTATTACAAATGTGCAACATCTGGTTGCAACATTCGAAAGCGTGTAGAGAGAGCTTGGGCGGATCCTAAAGATTTCATAACAAATTACGAAGGAAGACATAATCATGACGTGCCAATACCTAAGGCTAATAGCCACACTATTTCCAACACCATTTCTAAGAAGCCTAGTTTTGGCAATATTGGTAATGGTGGCCACAATATTTAA 672 0.3929 MLGVYPLQQIHKSIPNGPNFTTSPLETHYNQKIHISVGGIGNVDADANSPSSSLPATAPSSQTVFGNIPIAPSSSNSPHLTSTFHVFMIGSLIYALFLALINIEIAVLDQIASSYRSVREPRKIIITTSEVDLLDDGYVWRKYGQHVVRGNPNPRSYYKCATSGCNIRKRVERAWADPKDFITNYEGRHNHDVPIPKANSHTISNTISKKPSFGNIGNGGHNI* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1220 223 ProSiteProfiles WRKY domain profile. 129 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal1g1220 223 SUPERFAMILY WRKY DNA-binding domain 126 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal1g1220 223 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 110 207 IPR044810 GO:0003700
Mal1g1220 223 Gene3D WRKY domain 120 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal1g1220 223 SMART WRKY_cls 134 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal1g1220 223 PANTHER OS04G0471700 PROTEIN 110 207 - -
Mal1g1220 223 Pfam WRKY DNA -binding domain 135 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1220 Mal-Chr1 15374031 15377854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1220 102 203 WRKY Transcription Factor Family AT2G03340 63.725 2.06e-42 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal1g1220 WRKY 1.4e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1220 - - mtr:MTR_1g077780 174.866