Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1212 ATGGCAATGGCAATGCCTCTTAGTTTAAGGAATAAGCTAAAAACTCTTTGTGCTTATGGTGATGGTTGGTCTTATGCAATTTTCTGGCGTTTTCATGAGAAGAATCCTATGTTGCTAAATGTGGAAGAAACATACTATGGAGAGGAATTGGGAGAAGAGATTACAAAAATGCTTCCACAAGTGCACTTGCTGGGTGAAGGAATTGTTGGTGAAGCTGCTTTCACAGGCAAGCACAGTTGGTTGCATTCAGTTAGTTGTGAGAATGATTCTGGATTGTATCAGCAATTCTCCTCTGGCTTAATAAAGACAATTGTGGCCATACCTGTCAAAGCATGTGGAGTGGTACAGTTTGGATCCAGAAATAAGATTTTGGAGACAATGGATTTTTTGGATTATACACAAAGTTTGCTCAAGGAGATAGACGGTATCAACATGATAGACGAGTCAGCAAATGAAGTTTTATCAATGGATTTTACAAATGATGATCTCAATGGATTTTTAGCTTCCATTTCCTCTGAAAATTCATGTGATTGGAATCTCAAATATGCTCATGAAGAAAACCATAACGATCTGAGCGAAGTTTTTTCTTCGTGTGAAGAAAGAATAACTTCACTGGAATTTGATTCCTCATCTCTTAGTGACCAATTGAAAGATACCATAGAAGCTTTTCTGGAGCCTAACTCTTCTATGAACAACTTGATTTCCAAAAACACCCACCTTTTTGGTGAAAATTCTTGTTTTGATTCAGTGGAGCAACAATTTGTATCTGAAATAATGGCACAAGAAGTTGCAGATGTTTCAACTTCATTTGCTAGCAGCATAGTTCCGGTTTCAGAATTGACATCATTGCAAAATATGGACAAAGTTTCATTTCAAGACAAACATTCTTCTGAATCTAATGTTGTGATTGAAGTTGATTTACCATCAAATTCAAATACACTGCTTCATGGAATCTCTAATAGCGTAGAGCTGGTCAATATGTCCGAAGAATTTTTGAAGTTCAGTTCCATGGATGATCTTTGCCAATGGTTTTCTCCTTCACCAGAAGATACTAGTATCTGCAAAACAATGATTCAATTGGATAATAACCTTTCTGAACCAATAGAGTTTAATCCTACTTGTTCTGATCTGGGCCTAACTGAGAAAGAAACATCTGTAGTAATACATAGTTCTGAGAATGATTTATTGGATGGCATGGAATTTTATTTGGGATGTGATCAAGAAAGTGATTGGTGGGGAAATTTACTTACACCAGTGGTGAGTGCTGCTACCGATAACAACTTTTCCGAATGCATATCGGTGTTGAATACTAGTACTAGTACACAAACCGATAATACTCGAAAGAGGTTATTCTCAGAGTTGGGAATTGAAGAGCTTTTGAGAGGTGAAGAAAATTACAACAATCCTTTGAATAGTTCTAGTTTTGAAAATGAGTCATCATGTAATAAAAAGCAGATGGTAGAATTTTCGCACATGAATAGAACTCAAGTACATTTTGCAAACCTTGCTGAGGCTGAGGCTAGACCAAATTTGATGCATTCTGTTTCTGATTTGGACAAGTCCAATAGTGTTTTAACTAAGAAAGATACATTTCCAACATTACAAGTAGGTATGTTGGTTAATGATAGAAATAGCATCAATATTAAGAGGGCTGTTCCGGTACACCAGAGAAAACCGGATGAGCCTGCAAAGCCGAACAAGAAGAAGGCTAAGCCTGGGGATAGTACTCGACCGCGACCAAAAGATCGGCAGCAGATCCAAGACTGTATTAAAGAGTTGAGAGGAATCATCCCTCAAGGTGGAAAGTGTAGCATCGATTCTTTGTTAGACCGCACGATCAGATACATGCTTTTCTTACGCGGCGTCATCAAGTATGCTGACATACTACAAGAGCCTAATGAGCCAAAGCTTATTGACCAAGAAAACGGAGTGGTTCCAAAAGACAAAAACCATGGTGCTACATGGGCATTTGAAGTAGCAAACCAAACAATGGTATGTCCAATTATAGTTGAGGACATGAATCCACCTGGCCAAATGCTTATAGAGATGCTTTGTGAGGATCAAGGTTTCTTCCTTGAGATAGTCGACATAATTCGAGGTTTCGGGCTGAATATCTTGAAAGCAAAGATGGAAACAAGGAAGAAAAAACTATGGGCGCGCTTTATTGTTGAGGCAAATAGACATGTGACGAGGATAGATGTGTTTTGGTCACTTATCCATCTTCTACAACAACCAAACGCCACCGGAGTTGATTCTTCTAATAAGCATTGCAATGTTATTAATTCCAGCATTGCTTAA 2298 0.3812 MAMAMPLSLRNKLKTLCAYGDGWSYAIFWRFHEKNPMLLNVEETYYGEELGEEITKMLPQVHLLGEGIVGEAAFTGKHSWLHSVSCENDSGLYQQFSSGLIKTIVAIPVKACGVVQFGSRNKILETMDFLDYTQSLLKEIDGINMIDESANEVLSMDFTNDDLNGFLASISSENSCDWNLKYAHEENHNDLSEVFSSCEERITSLEFDSSSLSDQLKDTIEAFLEPNSSMNNLISKNTHLFGENSCFDSVEQQFVSEIMAQEVADVSTSFASSIVPVSELTSLQNMDKVSFQDKHSSESNVVIEVDLPSNSNTLLHGISNSVELVNMSEEFLKFSSMDDLCQWFSPSPEDTSICKTMIQLDNNLSEPIEFNPTCSDLGLTEKETSVVIHSSENDLLDGMEFYLGCDQESDWWGNLLTPVVSAATDNNFSECISVLNTSTSTQTDNTRKRLFSELGIEELLRGEENYNNPLNSSSFENESSCNKKQMVEFSHMNRTQVHFANLAEAEARPNLMHSVSDLDKSNSVLTKKDTFPTLQVGMLVNDRNSINIKRAVPVHQRKPDEPAKPNKKKAKPGDSTRPRPKDRQQIQDCIKELRGIIPQGGKCSIDSLLDRTIRYMLFLRGVIKYADILQEPNEPKLIDQENGVVPKDKNHGATWAFEVANQTMVCPIIVEDMNPPGQMLIEMLCEDQGFFLEIVDIIRGFGLNILKAKMETRKKKLWARFIVEANRHVTRIDVFWSLIHLLQQPNATGVDSSNKHCNVINSSIA* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1212 765 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 7 764 IPR043561 GO:0003700|GO:0006355
Mal1g1212 765 MobiDBLite consensus disorder prediction 553 585 - -
Mal1g1212 765 CDD ACT_UUR-ACR-like 680 723 - -
Mal1g1212 765 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED 7 764 - -
Mal1g1212 765 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 583 625 IPR036638 GO:0046983
Mal1g1212 765 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 53 135 IPR025610 -
Mal1g1212 765 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 570 619 IPR011598 GO:0046983
Mal1g1212 765 MobiDBLite consensus disorder prediction 549 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1212 Mal-Chr1 15244237 15248696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1212 547 752 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 52.885 2.79e-65 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1212 - - cam:101509177 1045.8