Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1188 ATGGCGAAAAAATGCGAAGACCGTGCTGTGGGAATAGATCTTGGCACAACCTACTCGTGTGTTGCAGTATGGCAGGAACAACACAGTAGAGTTGAGATTATTCACAATGACCAAGGCAACAAAACAACACCTTCTTTTGTTGCTTTTACTGATAATGAAAGGTTGATCGGTAATGCCGCTAAGAATCAAGCTGCTACCAACCCACAAAACACTGTCTTTGATGCTAAGAGGTTAATCGGCAAAAAATTTAGTGATCCTGATGTTCAAAAAGATACAATGTTGTGGCCATTCAAAGTTATTGCTGGTGTTAATGACAAACCAACGATTTCCCTTAAGTATAAGGGTCAGGAGAAGCACCTATGTGCAGAGGAAATCTCATCTATGATCCTCTCAAAGATGCGGGATATTGCAGAGGAATATTTGGAATCACCTATTAAGAATGCAGTTATTACCGTGCCTGCTTATTTTAATGATTCTCAGCGAAAAGCTACTGTGGATGCTGGTACCATTGCTGGCCTCAATGTATTGCAAATAATCAATGAACCCACTGCTGCAGCTATTGCATATGGCCTTGACAAGAGAGCTGACTTTGTGGGAGAACGAAATATTTTTGTCTTTGACCTTGGTGGTGGGACTTTTGATGTGTCTCTCCTTACAATTAAAGATAAGGTCTTTGAAGTTAAGGCCACTTCCGGTAACACTCACCTCGGAGGAGAGGACTTTGATAATAGAATGGTGAACCACTTTGCAAAGGAGTTCAAGAGGAAGCATAATAAGGATATTAGTGGAAACCCTAGAGCCTTGAGGAGGTTGAGAACTGCGTGCGAGAATGCAAAGAGGACACTCTCTTTTTCTGTTGTCACTACAGTTGAGGTAGATTCTTTATATGAGGGAATTGACTTCTATTCGTCAATCACTCGTGCCAAGTTTGAGGAAATCAATATGGACTTCTTTAAAGAGTGCATGAGGATTGTTGAGAGTTGTCTTATTGATGCTAAGATGAACAAGAGTAGTGTGCATGATGTTGTCCTTGTTGGTGGCTCTTCTAGGATTCCCAAAGTGCAGCAGCTATTGCGGGACTTTTTCAATGGGAAGGATCTATGCAAGAGCATCAACCCTGATGAGGCTGTCGCTTATGGCGCAGCTGTGCAAGCTGCTTTGTTGAGTGAAGGCTTTAAGAATGTTCCAAACTTGGTGCTGCGAGATGTTACACCGTTGTCACTAGGTTGGATGCTAGAAGATGATATCATGGGTGTGGTGATTCCGAGGAACACTTCCATTCCTGTTAAGAAGACTGAAGAATTTTTTACGGTTCAAGATAACCAATCCAGTGTCCTTATAGATGTTTACGAGGGTGAAAGAACAAGGGCAAGTGATAACAATTTTCTTGGGTCATTTCATCTTTGCAACTTACCGCCTGCTGCTTCTGGCCATCCTTTCGATGTATGCTTTGATATCGATCAAAATGGCATCCTAACCGTTTCTGCTAAGGAAAAATGGACTGGTAATATGAATAAGATTACAATAACCAATGACAAAGGAAGGTTGTCGACTAAAGAAATTGAAGAAATGATTCGAGAAGCTGAGGATTACCGTGTTGAAGATCAGAAATTCTTACGGAAGGCCGAGTTAATGAATGAATTGGATGACTGCGTTAACAGAATGAGAAATGATTTTAAACTCTCGTCGGAAGAATACGAGAAGATCAATTCTTTAAGTACAACGGCCACAAATTTGCTTGATGAGGATGACAATGTTCTTGAGGATAATAGCCTAGTCTAA 1782 0.4102 MAKKCEDRAVGIDLGTTYSCVAVWQEQHSRVEIIHNDQGNKTTPSFVAFTDNERLIGNAAKNQAATNPQNTVFDAKRLIGKKFSDPDVQKDTMLWPFKVIAGVNDKPTISLKYKGQEKHLCAEEISSMILSKMRDIAEEYLESPIKNAVITVPAYFNDSQRKATVDAGTIAGLNVLQIINEPTAAAIAYGLDKRADFVGERNIFVFDLGGGTFDVSLLTIKDKVFEVKATSGNTHLGGEDFDNRMVNHFAKEFKRKHNKDISGNPRALRRLRTACENAKRTLSFSVVTTVEVDSLYEGIDFYSSITRAKFEEINMDFFKECMRIVESCLIDAKMNKSSVHDVVLVGGSSRIPKVQQLLRDFFNGKDLCKSINPDEAVAYGAAVQAALLSEGFKNVPNLVLRDVTPLSLGWMLEDDIMGVVIPRNTSIPVKKTEEFFTVQDNQSSVLIDVYEGERTRASDNNFLGSFHLCNLPPAASGHPFDVCFDIDQNGILTVSAKEKWTGNMNKITITNDKGRLSTKEIEEMIREAEDYRVEDQKFLRKAELMNELDDCVNRMRNDFKLSSEEYEKINSLSTTATNLLDEDDNVLEDNSLV* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1188 593 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 394 549 IPR029047 -
Mal1g1188 593 Gene3D Actin; Chain A, domain 4 237 320 - -
Mal1g1188 593 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Mal1g1188 593 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Mal1g1188 593 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 389 569 IPR029047 -
Mal1g1188 593 Gene3D - 73 128 - -
Mal1g1188 593 PRINTS 70kDa heat shock protein signature 38 50 - -
Mal1g1188 593 PRINTS 70kDa heat shock protein signature 60 68 - -
Mal1g1188 593 PRINTS 70kDa heat shock protein signature 339 355 - -
Mal1g1188 593 PRINTS 70kDa heat shock protein signature 211 221 - -
Mal1g1188 593 PRINTS 70kDa heat shock protein signature 8 21 - -
Mal1g1188 593 PRINTS 70kDa heat shock protein signature 371 391 - -
Mal1g1188 593 PRINTS 70kDa heat shock protein signature 397 416 - -
Mal1g1188 593 PRINTS 70kDa heat shock protein signature 477 493 - -
Mal1g1188 593 PRINTS 70kDa heat shock protein signature 148 168 - -
Mal1g1188 593 Gene3D - 194 368 - -
Mal1g1188 593 PANTHER HEAT SHOCK PROTEIN 70KDA 5 585 IPR013126 GO:0005524|GO:0140662
Mal1g1188 593 SUPERFAMILY Actin-like ATPase domain 200 389 IPR043129 -
Mal1g1188 593 Gene3D - 10 386 - -
Mal1g1188 593 SUPERFAMILY Actin-like ATPase domain 9 193 IPR043129 -
Mal1g1188 593 Pfam Hsp70 protein 9 577 IPR013126 GO:0005524|GO:0140662
Mal1g1188 593 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Mal1g1188 593 PANTHER HEAT SHOCK 70 KDA PROTEIN 5 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1188 Mal-Chr1 14885498 14888688 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1188 1 560 Calmodulin-binding Proteins AT3G12580 69.573 0.0 814
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1188 K03283 - gmx:102667578 861.292