Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1182 ATGGCAACTAGAATTCAGTTTGAGAATTCTTGTGAAGTTGGAGTCTTCTCAAAACTTACCAATGCTTATTGTTTGGTTGCAATTGGAGGTTCTGAAAATTTCTACAGCGCATTTGAGGCTGAGTTATCAGATGTTATCCCTGTGATCAAAACCTCCATTGGTGGTACTCGTATTGTTGGTCGTCTTTGTATTGGAAACAAGCACGGGCTTCTATTGCCCCATACCACCACAGACCAAGAACTTCAACATTTGAAAAACAGTCTACCTGATCAAGTACGTGTTCAGCGCATAGAGGAAAGATTATCTGCTCTGGGAAATTGTATAGCATGTAATGACCATGTGGCCCTCACGCACACTGACCTCGACAAGGAAACTGAGGAGGTGGTTGCAGATGTTCTTGGAGTAGAAGTTTTCAGGCAGACAGTTGCTGGTAATATTCTTGTGGGAAGTTACTGTGCTTTCTCCAACAAAGGTGGTTTGGTTCATCCTCATACTTCCATTGAAGACTTGGATGAGCTATCTACACTTCTTCAAGTTCCTTTGGTTGCCGGGACTGTCAATCGTGGTAGCGAAGTAATCGCTGCTGGCATGACGGTAAATGATTGGACAGCATTTTGTGGTTCAGACACCACAGCAACAGAACTCTCATTGATTGAGAGTGTTTTCAAGCTGAGGGAAGCCAAGCCTAGTGCCATTGTGGATGATATGAGGAAATCTCTCTTTGATGGCTATAACTCAGTTTCTCTAAAAGTATTCACTTTTCATACTAGGTTATACTGCTTGTAA 786 0.4249 MATRIQFENSCEVGVFSKLTNAYCLVAIGGSENFYSAFEAELSDVIPVIKTSIGGTRIVGRLCIGNKHGLLLPHTTTDQELQHLKNSLPDQVRVQRIEERLSALGNCIACNDHVALTHTDLDKETEEVVADVLGVEVFRQTVAGNILVGSYCAFSNKGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSLIESVFKLREAKPSAIVDDMRKSLFDGYNSVSLKVFTFHTRLYCL* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1182 261 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 245 IPR002769 GO:0042256|GO:0043022
Mal1g1182 261 SMART eIF6neu2 3 204 IPR002769 GO:0042256|GO:0043022
Mal1g1182 261 PIRSF Transl_init_IF-6 1 226 IPR002769 GO:0042256|GO:0043022
Mal1g1182 261 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 245 - -
Mal1g1182 261 Hamap Translation initiation factor 6 [eif6]. 1 245 IPR002769 GO:0042256|GO:0043022
Mal1g1182 261 Gene3D - 1 225 - -
Mal1g1182 261 CDD IF6 2 223 IPR002769 GO:0042256|GO:0043022
Mal1g1182 261 Pfam eIF-6 family 4 203 IPR002769 GO:0042256|GO:0043022
Mal1g1182 261 SUPERFAMILY Pentein 1 224 - -
Mal1g1182 261 TIGRFAM eIF-6: putative translation initiation factor eIF-6 4 224 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1182 Mal-Chr1 14819095 14821244 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1182 1 244 Eukaryotic Initiation Factors Gene Family AT3G55620 87.295 8.45e-167 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1182 K03264 - gmx:100777602 458.373