Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1180 ATGGCAATTAGGCTTCAATTTGAGAATTCTTGTGAAATTGGAGCCTTCTCAAAACTTACCAATGCCTATTGTTTGACTGCCATTGGAGGTTCTGAAAATTTCTACAGTGCATTTGAGGCTGAATTAGCAGATATTATCCCTGTGGTCAAAACATCCATTGATGGCACTCGCCTTGTTGGTTTTCTTTCTGTTGGAAACAAGAATGGGCTTTTATTGCCTCATACCACCACTGACCAAGAACTTCAACATCTGAGAAACAGTCTACCTGATCATGTTGTTGTTGAGCGTATACAAGAAAAACTGTCTGCTCTGGGAAATTGTATAGCATGCAATGACCATGTGGCCCTCACACACACTGATCTCGACAAGGAAACTGAGGAGCTGATTGCTGATGTTCTTGGAGTTGAAGTTTTCAGGCAGACAATTGCTGGTAATACTCTTGTGGGCAGTTACTGTGCTTTGTCCAACAGAGGTGGTTTGGTTCACCCTCGTACTTCCATTGAAGACTTGGATGAACTGTCTACACTTCTTCAAGTTCCTTTGGTTGCTGGGACCGTCAATCGTGGTAGTGAAGTGATAGCTTCTGGCTTGGTAGTAAATGATTGGACAGCATTTTGTGGCTCAGACACCACAGCAACAGAGCTCTCTGTGATTGACCGTGTTTTCAAGCTGAGGCCAGATGATATGCGATACGCCGATACCTAG 705 0.4369 MAIRLQFENSCEIGAFSKLTNAYCLTAIGGSENFYSAFEAELADIIPVVKTSIDGTRLVGFLSVGNKNGLLLPHTTTDQELQHLRNSLPDHVVVERIQEKLSALGNCIACNDHVALTHTDLDKETEELIADVLGVEVFRQTIAGNTLVGSYCALSNRGGLVHPRTSIEDLDELSTLLQVPLVAGTVNRGSEVIASGLVVNDWTAFCGSDTTATELSVIDRVFKLRPDDMRYADT* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1180 234 Pfam eIF-6 family 4 203 IPR002769 GO:0042256|GO:0043022
Mal1g1180 234 PIRSF Transl_init_IF-6 1 226 IPR002769 GO:0042256|GO:0043022
Mal1g1180 234 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 226 - -
Mal1g1180 234 TIGRFAM eIF-6: putative translation initiation factor eIF-6 4 223 IPR002769 GO:0042256|GO:0043022
Mal1g1180 234 Gene3D - 1 225 - -
Mal1g1180 234 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 226 IPR002769 GO:0042256|GO:0043022
Mal1g1180 234 CDD IF6 2 223 IPR002769 GO:0042256|GO:0043022
Mal1g1180 234 SUPERFAMILY Pentein 1 224 - -
Mal1g1180 234 SMART eIF6neu2 3 204 IPR002769 GO:0042256|GO:0043022
Mal1g1180 234 Hamap Translation initiation factor 6 [eif6]. 1 234 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1180 Mal-Chr1 14806199 14808079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1180 1 230 Eukaryotic Initiation Factors Gene Family AT3G55620 81.857 6.82e-147 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1180 K03264 - rcu:8275684 404.06