Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1177 ATGGCCACCAGACGTTTAAGGGCATTCAAGCGATGGATGAAGTCCAATGGATTCGAATGGAGCAATGCATTGGAGTTTGTGGACACCCCAGAAGAGGGAATAGCTGTTAAAGCATTGTGTGAAATGAATGAAGGTGATGTGGTTGCTAAAATGCCAAAGAAAGCTTGTCTTACAATCAAGACTAGTGGTGCATGTGAGATTATTGAAAATGCTTGTTTGGGTGGTTATTTGGGTTTAGCTGTTGCTATTATGTATGAGAGAAGTTTGGGTGGAGAGTCTCCTTGGGCTGGTTATATTCAGCTTTTGCCTCAACAGGAATGTTTGCCTTTGGTTTGGAGTGTTGATGAAGTGAATCAGCTTTTGTGTGGTACTGAGCTTCATCAGACAGTGCAAGAAGACAAAGCTCTCGTCTCCGAGGACTGGAAAGAGAATATTCTACCCCTGTTGGATTCAGAACCTTCTAAGCTTAACCCGGTATTCTTTGGTGTGGAACAATACTTTGCCGCCAAAAGTCTTATTTCTTCGCGATCATTCGAGATAGATGACTACCATGGTTTTGGTATGGTTCCCCTGGCAGACCTATTTAATCACAAAACGGGTGCGGAAGATGTGCATTTCACCGCTTTGTCTTCTAATTATGAATCTGACAATGACGCTGATGATGAAATTGTTGATGAAGAAGCATTAGATCAAAATTCCTCAATGGATAAGACTGAGAAGGATGTTGATAGCGACATGGAGTCTTCTTCAATTACTGAGGAAGATACTTCAATGCTGGAGATGGTTATGATAAAAGATGTTAGCAGTGGAGCTGAGGTATTTAATACTTACGGCATATTAGGTAATGCCGCTTTGCTTCATAGATATGGATTTACTGAGCAAGATAACACCTATGACATTGTGAACATTGATATGGAACTGGTACTTCAGTGGTGTTCTTCTTTGTTCTCTGACCGCCACAGCAGATCAAGAATCTCCCTTTGGAGAAGGTTAGGCTATTCCGGTGACAGCGAAAACTCTGAATATTTCGAGATATCATTTGATGGAGAACCACAGATTGAACTCCTCATTTTATTATACATCATATTTTTACCAGATGATGTCTACCGTAAATTAGACTTATCAGTAGCAGTTGCTGGAAACTGTCACGAATCAAGTGAAACCGCTTTTTTGAATGGTACTATTTTTCCAAATAAGGCGTCTAATATGAGCAAGAAAACTTTGCTGACCAAAGAAGTTTGTGAGGCTTTGTTGTCACTGGCTGATATAAGGGAGAGTCTCTATGGTTTGAAATCAATAGAAGATGACATTGAGGCATTGGCAAGGTGTAGTTTTGTTAGAGATAGAAAGCTGTATCATTCTTCGGTTCTGCGTATCAGTGAAAGGAAGATCCTTCAAAAACTCAGAAATTATGCTTCACAGTCATGTAAGATTACTAATCCTAGTTCTTCCGGGAAGAAGTTGAAAAGAACAACAAAGAGGGAGAGTTGA 1491 0.4017 MATRRLRAFKRWMKSNGFEWSNALEFVDTPEEGIAVKALCEMNEGDVVAKMPKKACLTIKTSGACEIIENACLGGYLGLAVAIMYERSLGGESPWAGYIQLLPQQECLPLVWSVDEVNQLLCGTELHQTVQEDKALVSEDWKENILPLLDSEPSKLNPVFFGVEQYFAAKSLISSRSFEIDDYHGFGMVPLADLFNHKTGAEDVHFTALSSNYESDNDADDEIVDEEALDQNSSMDKTEKDVDSDMESSSITEEDTSMLEMVMIKDVSSGAEVFNTYGILGNAALLHRYGFTEQDNTYDIVNIDMELVLQWCSSLFSDRHSRSRISLWRRLGYSGDSENSEYFEISFDGEPQIELLILLYIIFLPDDVYRKLDLSVAVAGNCHESSETAFLNGTIFPNKASNMSKKTLLTKEVCEALLSLADIRESLYGLKSIEDDIEALARCSFVRDRKLYHSSVLRISERKILQKLRNYASQSCKITNPSSSGKKLKRTTKRES* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1177 496 CDD SET_LSMT 23 292 - -
Mal1g1177 496 Gene3D set domain protein methyltransferase, domain 1 2 291 - -
Mal1g1177 496 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 5 478 - -
Mal1g1177 496 SUPERFAMILY SET domain 4 296 IPR046341 -
Mal1g1177 496 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 288 484 IPR036464 -
Mal1g1177 496 Pfam SET domain 33 278 IPR001214 GO:0005515
Mal1g1177 496 ProSiteProfiles SET domain profile. 22 278 IPR001214 GO:0005515
Mal1g1177 496 MobiDBLite consensus disorder prediction 477 496 - -
Mal1g1177 496 PIRSF RMS1_SET 1 476 IPR011383 GO:0016279|GO:0018026
Mal1g1177 496 PANTHER RIBOSOMAL LYSINE N-METHYLTRANSFERASE 3 5 478 - -
Mal1g1177 496 MobiDBLite consensus disorder prediction 226 251 - -
Mal1g1177 496 MobiDBLite consensus disorder prediction 230 247 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1177 1 494 NAC Transcription Factor Family AT3G56570 55.993 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal1g1177 SET 9.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1177 K05302 - gmx:100794971 759.985