Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1174 ATGGAGTCTAGCATTTTTCATGTTGAGAAAAAGATAATAGTGAAATATAAAGAGTGTCTGAAGAACCATGCAGCTACAATTGGTGGCAATGCAATTGATGGATGTGGTGAGTTCATGCCAAGTGGAGAACATGACACACTTGAAGCTCTCAAGTGTTGTGCTTGCAATTGCCATAGAAACTTTCACAGAAAAGAAATAGAGTCTGATTTCAATAGCCCTTCTCAGCATTTTGCTGCAATTTCACTGATTCCTGATCATAACATTAATGCACCCTTTTTGGCTCATTTATCTCCAAAGAAAAGTGAATCAACTAGTCCTTATGATCACTCTTATTATGACAAAGATTGTATTAAGGAGGTGGAAAATCGAACCGAAGAGATGATAATTAAGAAGAGGTCTAGAACTAAGTTCAGTAAAGAACAGAAGGAGAAGATGTTGTGTTTTGCAGAAAAGGCAGAGTGGAGGATTCAGAAGCTAGAAGAATCTGTGGTGCAGAAGTTTTGTCAAGAGATTGGAATCAAGAGAAGAATACTCAAAGTGTGGATGCATAATAACAAGAACACTTTTGCCAAGAGAAATCTTTCTACAGGCTAG 594 0.3737 MESSIFHVEKKIIVKYKECLKNHAATIGGNAIDGCGEFMPSGEHDTLEALKCCACNCHRNFHRKEIESDFNSPSQHFAAISLIPDHNINAPFLAHLSPKKSESTSPYDHSYYDKDCIKEVENRTEEMIIKKRSRTKFSKEQKEKMLCFAEKAEWRIQKLEESVVQKFCQEIGIKRRILKVWMHNNKNTFAKRNLSTG* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1174 197 SUPERFAMILY Homeodomain-like 127 191 IPR009057 -
Mal1g1174 197 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 16 65 IPR006456 -
Mal1g1174 197 Pfam ZF-HD protein dimerisation region 14 66 IPR006456 -
Mal1g1174 197 Gene3D - 116 191 - -
Mal1g1174 197 PANTHER HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN 9 193 - -
Mal1g1174 197 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 15 66 IPR006456 -
Mal1g1174 197 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 130 187 IPR006455 -
Mal1g1174 197 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 9 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1174 Mal-Chr1 14708769 14709362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1174 10 193 ZF-HD Transcription Factor Family AT1G14440 49.268 1.65e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mal1g1174 ZF-HD_dimer 2.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1174 - - gmx:100793926 257.684