Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1171 ATGTCTTCAACAAATAACCAGTTAGAAGCAACTGAACTTTTTGAAGGCCAATCTATCTTATACATGCACATGTTTGGCTTTCTAAAATCCATGTCAATTAAATGGGCTATTCAACTAAACATTCCAGACATAATTTACAACCATGGAAAACCCATTACTTTTTCTGAATTAGTTTCAACTCTTCAAATTCCACTATCTAAAGCTAGTCTTGTCAAAAGACTCATGCGTTTTCTAGCACATAATGGAATCTTTGCAATCCATGATGATGATCAAACATATGGTTTGACTCCTGCATCAAAGCTCCTTTCAAAATCATGTTGCAAAGACCATTGTTTAACACCAATGGTTCTTATGTCAACTGATCCAATTTTGATGGGAAAATTTCATCAATTGGGTGATTGGATTTGTGGAGAAATTCCAACTTTATATGAGGCAGCTTTAGGGTCAACTGTGTGGGAATTTCTTGAACAAAAACCTGAATATATGAGTATATTTAATCAAGCTATGGCTAGTGATTCTCAAATGGTGAATTTGGCTTTGAAAAATTGTAGTGAGGTGTTTGAAGGGATTGATTCTATTGTGGATGTTGGTGGTGGAACTGGTACCACAGCTAAAATTATATGTGAGGCTTTTCCTAAGTTGAAATGTGTTGTTTTTGATCTTCCACAGGTTGTGGCAAACTTGTCATCAGGATGTGACAATTTAAGTTATGTTGGTGGAGACATGTTCAAATCTATCCCAGAAGCTGATGCAATTATGCTAAAGTGGATTTTACATGACTGGACCGATGAAATTTGCATAAAGATTCTGAAAACTTGTAAAGATTCTGTTTCAAGCAATGGCAAAAAAGGAAAAGTTATTATAATGGATATAATAATAAATGAAAAGGATGATGAGAAAGATATGACTGAAACAAAGCTTTGTTTGGATTTAATCATGATGGGGATTAATGGAAAAGAGAGAACTGGAAAAGAATGGAAGCAACTCTTGATAGAAGCAGGGTTCAAAGACTATAAAATATTTCCTTTATTTGGCTTTAGATCTCTAATCGAAGCCTATCCTTAG 1065 0.3437 MSSTNNQLEATELFEGQSILYMHMFGFLKSMSIKWAIQLNIPDIIYNHGKPITFSELVSTLQIPLSKASLVKRLMRFLAHNGIFAIHDDDQTYGLTPASKLLSKSCCKDHCLTPMVLMSTDPILMGKFHQLGDWICGEIPTLYEAALGSTVWEFLEQKPEYMSIFNQAMASDSQMVNLALKNCSEVFEGIDSIVDVGGGTGTTAKIICEAFPKLKCVVFDLPQVVANLSSGCDNLSYVGGDMFKSIPEADAIMLKWILHDWTDEICIKILKTCKDSVSSNGKKGKVIIMDIIINEKDDEKDMTETKLCLDLIMMGINGKERTGKEWKQLLIEAGFKDYKIFPLFGFRSLIEAYP* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1171 354 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 3 353 - -
Mal1g1171 354 Pfam O-methyltransferase domain 128 336 IPR001077 GO:0008171
Mal1g1171 354 Gene3D - 1 102 IPR036388 -
Mal1g1171 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Mal1g1171 354 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Mal1g1171 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 353 IPR029063 -
Mal1g1171 354 PANTHER O-METHYLTRANSFERASE 3 353 IPR016461 GO:0008168
Mal1g1171 354 Gene3D Vaccinia Virus protein VP39 107 354 IPR029063 -
Mal1g1171 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 354 IPR016461 GO:0008168
Mal1g1171 354 SUPERFAMILY "Winged helix" DNA-binding domain 12 104 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1171 Mal-Chr1 14647757 14651534 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1171 2 340 Monolignol Biosynthesis Gene Families AT5G54160 33.144 5.49e-57 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1171 K22588 - gmx:100819853 485.337