Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1155 ATGGAAGAAAGAGAGAATTTTGGTGCTGTGAATGTAGTGGGTGGTAATGAGGTTCCTGTAAGCTTTCAAGCTGCTCCAAGGATTGATAACAACTTGGATTTTTCCATGGCAACAATTCCGGCACCGGCTACGGTGCCGGCGATGAAAAAGAAGAGGGGGAGACCAAGGAAGTATGGACCAGATGGTAAGCCTACACCAGGAGCTGTGACAGCTCTTTCGCCGATGCCGATTTCTTCGTCGATTCCGTTGACTGGAGAGTTCTCTGCTTGGAAAAGGGGTAGAGGGAAGCCTGTTGAATCTATCAAGAAATCATCTTTTAAGTTTGATTTTGAAAGTCCACCAGGACAAGGTATAAGTGGAGGTGCAAATGTTGGTGAGGGAATTGCATATTCAGTAGGTGCCAACTTCACGGCTTATGTGCTTACAGTGAATTCTGGCGAGGATGTAACTATGAAAATTATGTCCTCCCAACAAGGATCACGTGCTATATGCATTCTCTCTGCAACTGGCACAATTTCAAATGTTACACTTCGTCAATCGACTTCTTCAGGGGGTACTTTAACATATGAGGGACGATTTGAGATTCTTTCCTTGTCTGGTTCCTTTATGCCAACTGAGAATGGGATTACAAGAAGCAGATCTGGTGGGATGAGTGTCTCTTTGGCAGGTCCGGATGGTCGAGTGTTAGGTGGTGGACTCGCTGGTTTGCTTATAGCTTCTGGTCCTGTGCAGGTTGTCGTGGGAAGTTTTCTTCCCGGTCACCATCTAGAGCACAAGAGCAAGAAGCCGAGGGTGGAACATAATATATCAACTATTACACATAATCCTCATCCTCCACATGTTAATCACCATATGTCTAATGAAGTAAGTTTTGGTGGAGTGAAGTCTATCATGACACCTGCTGCATTTCAAGAAGAGAATATTGTTTCTTTCAACAACAATGCTCAAGACTCTAGGAACAACTCATCTGCTGATGACAGAGATCCTTTACCTGAAAAGGACTCTAACCATAGCCAATCAAATGCTTGA 1029 0.4431 MEERENFGAVNVVGGNEVPVSFQAAPRIDNNLDFSMATIPAPATVPAMKKKRGRPRKYGPDGKPTPGAVTALSPMPISSSIPLTGEFSAWKRGRGKPVESIKKSSFKFDFESPPGQGISGGANVGEGIAYSVGANFTAYVLTVNSGEDVTMKIMSSQQGSRAICILSATGTISNVTLRQSTSSGGTLTYEGRFEILSLSGSFMPTENGITRSRSGGMSVSLAGPDGRVLGGGLAGLLIASGPVQVVVGSFLPGHHLEHKSKKPRVEHNISTITHNPHPPHVNHHMSNEVSFGGVKSIMTPAAFQEENIVSFNNNAQDSRNNSSADDRDPLPEKDSNHSQSNA* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1155 342 MobiDBLite consensus disorder prediction 46 67 - -
Mal1g1155 342 MobiDBLite consensus disorder prediction 255 287 - -
Mal1g1155 342 Pfam Plants and Prokaryotes Conserved (PCC) domain 138 250 IPR005175 -
Mal1g1155 342 SUPERFAMILY AF0104/ALDC/Ptd012-like 135 254 - -
Mal1g1155 342 Gene3D - 137 270 - -
Mal1g1155 342 MobiDBLite consensus disorder prediction 311 342 - -
Mal1g1155 342 ProSiteProfiles PPC domain profile profile. 133 275 IPR005175 -
Mal1g1155 342 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 11 332 - -
Mal1g1155 342 CDD DUF296 139 250 IPR005175 -
Mal1g1155 342 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 11 332 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1155 Mal-Chr1 14516961 14521083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1155 34 275 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 60.400 1.14e-83 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1155 - - gmx:100776862 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1155 1 14516961 14521083 Mal1g1155 1 14516961 14521083 ECH
Mal6g3113 6 90387318 90392813 Mal1g1155 1 14516961 14521083 PCT