Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1124 ATGGCTACTATTGGGCATGGTTTGAACCTGAAGGAGACTGAGCTTTGCCTTGGTTTGCCTGGTGCTGGCGGCGGCGGTGGCGGTGGCTCTGAGGTGGAAACTCCAAGGGCTTCTGGAAAGAGAGGTTTCTCTGAGACAGTTGATCTGAAACTTAACCTTCAAACCAAGGAGGATCTGAATGAGAATCTAAAGAATGTTTCAAAGGAGAAGACTCTCCTTAAGGACCCTTCCAAGCCACCAGCTAAGGCTCAAGTAGTTGGATGGCCACCAGTGAGATCATACAGGAAGAACATGATGGCACAGAAAGTTAACAATACTGAGGACACTGAGAAGACAACAACTGCTGGTGGTGCATTTGTTAAGGTTTCCATGGATGGAGCACCTTACCTTCGTAAGGTTGACTTGACAATGTACAAAACCTACAAAGATTTATCTGATGCCTTAGCCAAAATGTTCAGCTCCTTCACCACTGGTAACTATGGGGCCCAAGGAATGATAGACTTCATGAATGAGAGCAAGTTGATGGATCTTCTTAACAGCTCTGAGTATGTGCCAACCTATGAAGATAAGGATGGCGACTGGATGCTCGTGGGAGATGTCCCATGGGAGATGTTTGTTGGATCATGCAAGCGTCTCCGCATAATGAAAGGATCAGAAGCAATTGGGCTTGCACCAAGAGCAATGGAGAAATGCAAAAACCGAAGCTGA 708 0.4647 MATIGHGLNLKETELCLGLPGAGGGGGGGSEVETPRASGKRGFSETVDLKLNLQTKEDLNENLKNVSKEKTLLKDPSKPPAKAQVVGWPPVRSYRKNMMAQKVNNTEDTEKTTTAGGAFVKVSMDGAPYLRKVDLTMYKTYKDLSDALAKMFSSFTTGNYGAQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGLAPRAMEKCKNRS* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1124 235 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 5 228 IPR003311 GO:0005634|GO:0006355
Mal1g1124 235 Coils Coil 49 69 - -
Mal1g1124 235 MobiDBLite consensus disorder prediction 22 43 - -
Mal1g1124 235 PANTHER AUXIN-RESPONSIVE PROTEIN IAA7 5 228 - -
Mal1g1124 235 Pfam AUX/IAA family 37 226 IPR033389 -
Mal1g1124 235 SUPERFAMILY CAD & PB1 domains 110 216 - -
Mal1g1124 235 Gene3D - 111 229 - -
Mal1g1124 235 ProSiteProfiles PB1 domain profile. 117 217 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1124 Mal-Chr1 13995882 13998362 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1124 107 225 B3 DNA Binding Superfamily AT4G23980 30.252 1.71e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mal1g1124 AUX_IAA 2.6e-82 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1124 K14484 - gmx:547949 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g2931 1 42018668 42019349 Mal1g1124 1 13995882 13998362 ECH
Mal1g1124 1 13995882 13998362 Mal1g1124 1 13995882 13998362 ECH