Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1121 ATGGTAGGAGCAATGGTGGATAAGGCAGAGCTCTCGATGCCTTTCACATGTCGTTTGTGTTGTAATATTTTCAGAGAACCCACCACAATTTCTGAATGCTTGCATACTTTTTGCAGGGAATGTATAGAAAGGAAGCTAATAGATGAGAGGCTAAATCACTGTCCACTATGCAAAGTAGACTTGGGTTGTTCACCATTAGACAAACTAAAGGCTGATAATTCTTGGTTAACATTCTTGGATAAACTTCACCCTTCTGAAGGAAAGAGTGTTAAGCTAGGTGAAAATGTTCCTTCAACTCCATCGGTGACTAAAAAAAGGAAGAACTCTCAGTCATCTTCAAAATTCAATTCAAAAAAGGCCAAAACAGCTTCTAGAAAAGCTTCCAGAAAAATTAAGAAATATGTAAGAAGACGAAAACAGAATCAAGAAGAGCCAAAGGAGATGCAAGAAGAACTCCCTATCACTCCACAAGAACCAAAAGTTCCTGCTTCTGAACTTGATGCTGAAGCAGATGTTAAGAAAGATGTGAAACAACATGGTGGAACAGAAATTCTGGATGAAGTTTCTACAATTCTATCTGCTAGAAGAGCAAAAATTGCAGCTAGAAAAAAGTTTATCAGAACTGAATTAACTCCTACTTCTCAACCTGACAAAGTCACAGTTGATGAAAAGAAAGACGATAAGCGCCCCGAGCTTGAAACATCCACTGAGACTCTAAAAATCAGATTTAAGCAGACTTCTTCAAAACCAGAATCATCTAGTCAGAAAATAGTGTTCAAGAATGTTTCAAGGGACAATGCTGAATCAAGGAAAGGAAAAGCTGCTGCCTGTGATCCATTGAATTGGTTGGTGGAAACTACAGACATAAACAAGTCTCCTAGTAACTCCACCGTGCACGAAAATGGTTCCATCCCAATGCTCGTGGATTCTAGTGACAATGACTCTCATCAGGTTGAAGTTAAGAAACATTCTAACCATCAGACAGAAGCAGAAGGTGATCAAATTGAATCAGTTCCTCCAAAATCAACTTCCTTGAAGTTTAAGCTTAAAAGAGTGGACAACCAAGAAAAGAGAGTGAAGTTCTCTGAGGACTTGAATCTTCCAGCCCTACCTGAAAAAGAATGCAAGAAAGAATTTAGTCCTATTTGGTTCTCCTTGGTTGCTTCCAAAGAGCAGGAAGTTGGTGCACTGCCACAAATATCTTCTCCCTACATAATGGTCAAGAATGGCAGTTTACCTGTTTCTCGTATCAAAAAATATATTGTGCAGAAGCTTGATCTTGCTAGTGAAGCTGAGGTGGAGATCTTATTAGGAGGTAAGCCAGTTTTATGTTCAATGCAGCTGCAAAACTTGGTGGATATGTGGCTGGAAACAATGCCAAAGAATGAAAGGATTCAGACATCTGTTGGAAGCTCAGCTAAGGATTTTGTCATGGTCCTTTCATACAGTCGAAAGGCTTAA 1461 0.3922 MVGAMVDKAELSMPFTCRLCCNIFREPTTISECLHTFCRECIERKLIDERLNHCPLCKVDLGCSPLDKLKADNSWLTFLDKLHPSEGKSVKLGENVPSTPSVTKKRKNSQSSSKFNSKKAKTASRKASRKIKKYVRRRKQNQEEPKEMQEELPITPQEPKVPASELDAEADVKKDVKQHGGTEILDEVSTILSARRAKIAARKKFIRTELTPTSQPDKVTVDEKKDDKRPELETSTETLKIRFKQTSSKPESSSQKIVFKNVSRDNAESRKGKAAACDPLNWLVETTDINKSPSNSTVHENGSIPMLVDSSDNDSHQVEVKKHSNHQTEAEGDQIESVPPKSTSLKFKLKRVDNQEKRVKFSEDLNLPALPEKECKKEFSPIWFSLVASKEQEVGALPQISSPYIMVKNGSLPVSRIKKYIVQKLDLASEAEVEILLGGKPVLCSMQLQNLVDMWLETMPKNERIQTSVGSSAKDFVMVLSYSRKA* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1121 486 MobiDBLite consensus disorder prediction 87 164 - -
Mal1g1121 486 MobiDBLite consensus disorder prediction 215 237 - -
Mal1g1121 486 ProSiteProfiles Zinc finger RING-type profile. 17 58 IPR001841 -
Mal1g1121 486 SUPERFAMILY RING/U-box 15 66 - -
Mal1g1121 486 MobiDBLite consensus disorder prediction 218 237 - -
Mal1g1121 486 MobiDBLite consensus disorder prediction 92 118 - -
Mal1g1121 486 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 95 IPR013083 -
Mal1g1121 486 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIPH-RELATED 6 157 - -
Mal1g1121 486 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIPH-RELATED 149 485 - -
Mal1g1121 486 SMART ring_2 17 57 IPR001841 -
Mal1g1121 486 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 6 157 IPR044807 GO:0004842
Mal1g1121 486 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 149 485 IPR044807 GO:0004842
Mal1g1121 486 ProSitePatterns Zinc finger RING-type signature. 33 42 IPR017907 -
Mal1g1121 486 MobiDBLite consensus disorder prediction 321 340 - -
Mal1g1121 486 MobiDBLite consensus disorder prediction 119 136 - -
Mal1g1121 486 MobiDBLite consensus disorder prediction 137 153 - -
Mal1g1121 486 Pfam Zinc finger, C3HC4 type (RING finger) 17 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1121 Mal-Chr1 13928080 13931382 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1121 1 144 C3H Transcription Factor Family AT2G30580 35.443 1.94e-20 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1121 K16277 - pop:7474161 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1121 1 13928080 13931382 Mal3g5025 3 130338807 130343892 ECH
Mal1g1121 1 13928080 13931382 Mal1g1121 1 13928080 13931382 ECH