Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1114 ATGGTAAGAGCTCCTTGTTGTGAAAAGATGGGATTGAAGAGGGGTCCTTGGTCTCTTGAGGAAGATGAAATCCTTACATCTTACATCCAAAAACATGGCCATGGCAACTGGCGTGCCCTCCCTAAGCTAGCAGGCTTGTTAAGATGTGGGAAGAGTTGCAGACTTAGGTGGATTAACTATTTGAGACCAGATATCAAGAGAGGAAATTTCACAAATGAAGAAGAGGAAAATATCATTAAGCTGCATGAAATGCTTGGGAACAGGTGGTCGGCAATTGCAGCAAAATTACCAGGAAGAACGGACAATGAAATAAAAAATGTGTGGCACACACATTTGAAGAAGAAGCTAAATCAAACAAATTCAGAAGCTAAAAAAAGGGTGGTGACAAAATCAAAAATCAAACGTTCTGATTCAAATTCAAGCACAATAACACAATCAGAATCAGCATCAGCATCAGCATGCACTACTAGTTCTAGTGATTTTTCATCTGTTACAATTGGTGAAAGCAAAAATATAATAAAAAGTGAAGACATTGATTCTATGGAAGAGACAATGCCTGTAATTGATGAGAGTTTTTGGTCAGAAGCAGCAGCATTAGATGAAGCTTCAAATGATGTGAAATCAAATTCTTTGATAATCTCAAATGAGACATTGCCACTTCAATACCCTGATGAAATTCTTCCACAAAGTCATGATGATTATAATTCTAACTTGGATGATGGCATGGATTTTTGGTATGACATTTTCATTAGGACTGGTGATCAAATAGAATTGCCAGAGTTTTGA 786 0.3715 MVRAPCCEKMGLKRGPWSLEEDEILTSYIQKHGHGNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGNFTNEEEENIIKLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKKLNQTNSEAKKRVVTKSKIKRSDSNSSTITQSESASASACTTSSSDFSSVTIGESKNIIKSEDIDSMEETMPVIDESFWSEAAALDEASNDVKSNSLIISNETLPLQYPDEILPQSHDDYNSNLDDGMDFWYDIFIRTGDQIELPEF* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1114 261 CDD SANT 69 112 IPR001005 -
Mal1g1114 261 PANTHER MYB15 1 253 - -
Mal1g1114 261 SMART sant 13 63 IPR001005 -
Mal1g1114 261 SMART sant 66 114 IPR001005 -
Mal1g1114 261 CDD SANT 16 61 IPR001005 -
Mal1g1114 261 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mal1g1114 261 MobiDBLite consensus disorder prediction 119 157 - -
Mal1g1114 261 MobiDBLite consensus disorder prediction 134 157 - -
Mal1g1114 261 Gene3D - 68 148 - -
Mal1g1114 261 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mal1g1114 261 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mal1g1114 261 Gene3D - 14 66 - -
Mal1g1114 261 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Mal1g1114 261 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mal1g1114 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mal1g1114 261 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 253 - -
Mal1g1114 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1114 Mal-Chr1 13815916 13818154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1114 1 261 MYB Transcription Factor Family AT2G31180 48.507 6.46e-81 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal1g1114 Myb_DNA-binding 2.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1114 K09422 - gmx:100807569 387.882