Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1113 ATGTTTTCTTCTCACCATTGGACAACTTGCACTTCTATTGAGTTACGTTCAGCATTCTTTATGGACAAAGATGCATCAACTTGTTTTCAAATTCCTCAGGAATATGAATGTGTGCCAAATTGTGATGATGAATTAAAGCCTAAGATTGGACAAGTATTTGATATGTTAGAAGAAGGTAAAAAATTTTACGAAAAATACACACTCTCTGTCGGATTTAGTGTGTGTTCATCATCATCGACTATCAATAAAAACGGCGTGAAGCGTTGGAAGTATTTTGTTTGCTCGAAAGAGGGTTATTTGCGAAATAAGACGGATGATAAGGAGCAAAGTGAATCTACTGTCAAGGCTAAAAGAAGAAGGGCTTTAACAAGAGAAGGATGCAATGCAAATGTTGTTTTCAAATGGGTGGGGGAAGGTAAACCGTTTCTAAGGTCTGCAAGGAAAGTGAATTCCAGTCACAAAAGCTTATTACTAGCATGTAGTAGAGCAGATATTGGACCTTCAAAAGCTTTCCACTTATTAAAAGAACAATGTGGGGCTTATGAAAATGTTGGATGCACGCAGAGAGATCTTCAAAACTATTCCAGAGATTTAAAGAGTTTGAATAAAGATTCTGATGCACATGTTTTGATAGATTACTTTAGAAGGACGCAAGAAGTTAATACATCCTTTTATTATGCGTATGAGGTAGGTGAAGAAGGCCGATTGAAGCATGTTTTTTGGGCAGATGGTATTTGTAGGAAAAATTATTCCTTTTTTGGGGATGTGGTTTCATTTGATACTACATATCAAACAAATAAATATCATTTGATTTTTGCACCTTTCACCGGGATAAACCATCATCTTTTTATGGAGTTACTGGCTGATAATAACTCAATTCATTCTAAACCGAAACTAAAGTTGGAACGTGGTATAGAGAGGCATGCAAGAGATGTGTATACTCATGAGAACTTTTATATATTTCAACATGAATTATGGATTGCATGTGTGGATTGTGGGATTGAACATAAGAAAGATGAAGATGGGATGGAAATATTTCATATATATGATAATAGTGAGATCAATGGTAAACTTCGAGAAGTGGTGTATAACTTATCCAATCAAAATGCAAATTGCTCACGCAAAATGTTTCAGGCTGAAGGAATACTTTGTAGACACATACTTTGTGTTTTAAAGGGAAAAAAATTCAATGAAATACCAAGTAAGCACATTGTGAATAGGTGGACTAAGTTTGCAAACAGAACACCTATTATTGGCATAGCTGACAATGTCTTGGAAGAAGATAGCAAACACATTTCTGATGTGTGGAACCACTTACATAACTGTGTGGAGAAGGCTGGAAAAGATAAGGAAAAATGGCTTCTTGTGTTAGATGGGGCTGTTAACATGGAAAAACAATTGGACGAGTTTGAAGGGAGTTCTAAGAGAACCAGGACAGATGATTTGATTCTTGGGTCCAATATTCTTGACGAAGTAGAAATCCTTCCACCAAAATTTGTGGCAAAGAGAAGGCTATTGAACAAACACAAAAAAAAAAAAGCAAGACTTTGTAAGGTATGTGGTGAGTATGTGCATCATGACAGCCGCAATTGTCCCCAAAGATCATCTCCATAA 1614 0.36 MFSSHHWTTCTSIELRSAFFMDKDASTCFQIPQEYECVPNCDDELKPKIGQVFDMLEEGKKFYEKYTLSVGFSVCSSSSTINKNGVKRWKYFVCSKEGYLRNKTDDKEQSESTVKAKRRRALTREGCNANVVFKWVGEGKPFLRSARKVNSSHKSLLLACSRADIGPSKAFHLLKEQCGAYENVGCTQRDLQNYSRDLKSLNKDSDAHVLIDYFRRTQEVNTSFYYAYEVGEEGRLKHVFWADGICRKNYSFFGDVVSFDTTYQTNKYHLIFAPFTGINHHLFMELLADNNSIHSKPKLKLERGIERHARDVYTHENFYIFQHELWIACVDCGIEHKKDEDGMEIFHIYDNSEINGKLREVVYNLSNQNANCSRKMFQAEGILCRHILCVLKGKKFNEIPSKHIVNRWTKFANRTPIIGIADNVLEEDSKHISDVWNHLHNCVEKAGKDKEKWLLVLDGAVNMEKQLDEFEGSSKRTRTDDLILGSNILDEVEILPPKFVAKRRLLNKHKKKKARLCKVCGEYVHHDSRNCPQRSSP* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1113 537 ProSiteProfiles Zinc finger SWIM-type profile. 359 395 IPR007527 GO:0008270
Mal1g1113 537 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 186 282 - -
Mal1g1113 537 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 38 133 - -
Mal1g1113 537 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 287 431 - -
Mal1g1113 537 Pfam FAR1 DNA-binding domain 61 140 IPR004330 -
Mal1g1113 537 SMART 26again6 370 397 IPR006564 GO:0008270
Mal1g1113 537 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 287 431 IPR031052 GO:0006355
Mal1g1113 537 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 186 282 IPR031052 GO:0006355
Mal1g1113 537 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 38 133 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1113 Mal-Chr1 13806275 13808455 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g1113 FAR1 2.8e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1113 - - lja:Lj0g3v0232569.1 360.918