Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1101 ATGGATAGTTGCTGGTTTAATAAGTTCAAGTCAAAGGACAAAATGCATTCTTCAAAAAACAAGGAAACTACAGGCGTTTCGAAAGAAAGGTCAAAACCCCCAACAAATGAAGAAGCTCCTTCAAATGTCACCAAACAGAAGGTTGAAGCTGCAAAGCAGTACATAGAAAACCATTATAAGAAGCAGATGAAGGACCTGCAGGATAGAAAAGAACGACGTAATATGCTAGAAAAAAAGCTGGCTGATTCTGAAGTCTCTGAGGAAGAGCAGAACAATCTGCTTAAGTATTTTGAGAAAAAGGAGAGGGAATACATGCGACTTCAGAGGCATAAGATGGGGGCTGATGATTTTGAGCCCCTCACTATGATAGGGAAGGGTGCATTTGGAGAGGTCAGGATCTGCCGTGAGAAGGCAACTGGTCATGTATATGCTATGAAGAAGCTTAAGAAATCAGAGATGCTTCGCCGAGGCCAGGTTGAACATGTAAAAGCGGAGAGGAACCTACTTGCAGAAGTTGACAGCAATTACATTGTAAAGCTTTACTGTTCCTTTCAAGACGAACATTATTTATATCTCATAATGGAGTATCTTCCTGGTGGCGATATGATGACATTGCTCATGCGGAAGGATATACTGACAGACTATGAGGCCAAGTTCTATGTTGGGGAGACTATCCTAGCAATAGAGTCGATTCATAAACATAATTATGTTCACAGAGATATCAAGCCTGATAACTTGCTGCTAGATAGAAACGGTCACATGAAATTATCAGACTTTGGATTATGTAAACCACTAGACTGCAGTAATCTTCAGGAAAAGGACTTCTCTACCGGAATCAACAGAAGTGGAGCCCTTCAGAGCAATGGACAACCTGCGGCTCCTAAAAGGACTCAGCAAGAGCAACTGCAGCATTGGCAGAAAAATAGGCGAATGCTTGCCTATTCTACGGTAGGAACACCTGACTATATTGCCCCTGAAGTTCTACTGAAAAAAGGATATGGCCTGGAATGTGATTGGTGGTCTTTGGGAGCTATAATGTATGAAATGCTAGTGGGATATCCACCCTTTTATTCAGATGAACCAATGTTGACTTGTAGAAAGATAGTAAATTGGAGAACTTATTTAAAATTTCCAGAAGAAGCTAAACTATCAGCGGAGGCAAAGGATCTAATTTGTAGACTCCTATGTAATGTTGAACAGAGGCTTGGAACCAAAGGGGCTGATGAAATAAAGGCTCACCCATGGTTCAAAGGTGTTGAATGGGATAAATTGTACCAAATGAGAGCTGCTTTTATTCCTGAGGTCAATGATGAATTAGATACTCAAAATTTTGAGAAGTTTGATGAGGTGGACAACCAATCTCAACCTTCTTCAAAATCAGGTCCATGGAGAAAGATGCTGTCATCTAAGGATGTTAACTTTGTTGGCTACACATATAAGAACTATGAAATCGTGAATGATGATCATCTACCTGGAATGGCTGAATTGAAGAAGAAGAGCACAAAACCTAAAAGGCCATCCATTAAGACCCTATTTGATGATGATTCGGCTACCACTGCCAGTCAACCTGTCCAAGGGAGCTACTCAACAGGAAGTTCCCGAGAAGTGTGA 1611 0.4097 MDSCWFNKFKSKDKMHSSKNKETTGVSKERSKPPTNEEAPSNVTKQKVEAAKQYIENHYKKQMKDLQDRKERRNMLEKKLADSEVSEEEQNNLLKYFEKKEREYMRLQRHKMGADDFEPLTMIGKGAFGEVRICREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNYIVKLYCSFQDEHYLYLIMEYLPGGDMMTLLMRKDILTDYEAKFYVGETILAIESIHKHNYVHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSTGINRSGALQSNGQPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGLECDWWSLGAIMYEMLVGYPPFYSDEPMLTCRKIVNWRTYLKFPEEAKLSAEAKDLICRLLCNVEQRLGTKGADEIKAHPWFKGVEWDKLYQMRAAFIPEVNDELDTQNFEKFDEVDNQSQPSSKSGPWRKMLSSKDVNFVGYTYKNYEIVNDDHLPGMAELKKKSTKPKRPSIKTLFDDDSATTASQPVQGSYSTGSSREV* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1101 536 PANTHER SERINE/THREONINE-PROTEIN KINASE 38 525 - -
Mal1g1101 536 SUPERFAMILY Protein kinase-like (PK-like) 92 469 IPR011009 -
Mal1g1101 536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Mal1g1101 536 Coils Coil 59 79 - -
Mal1g1101 536 MobiDBLite consensus disorder prediction 512 536 - -
Mal1g1101 536 MobiDBLite consensus disorder prediction 1 35 - -
Mal1g1101 536 Gene3D Transferase(Phosphotransferase) domain 1 203 433 - -
Mal1g1101 536 SMART serkin_6 117 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1101 536 ProSiteProfiles AGC-kinase C-terminal domain profile. 417 489 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mal1g1101 536 MobiDBLite consensus disorder prediction 497 511 - -
Mal1g1101 536 CDD STKc_NDR_like 115 480 - -
Mal1g1101 536 SMART pkinase_C_6 417 481 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mal1g1101 536 MobiDBLite consensus disorder prediction 497 536 - -
Mal1g1101 536 ProSiteProfiles Protein kinase domain profile. 117 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1101 536 Pfam Protein kinase domain 119 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g1101 536 Pfam Protein kinase C terminal domain 435 479 IPR017892 GO:0004674|GO:0005524|GO:0006468
Mal1g1101 536 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 38 525 - -
Mal1g1101 536 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Mal1g1101 536 MobiDBLite consensus disorder prediction 1 49 - -
Mal1g1101 536 Gene3D Phosphorylase Kinase; domain 1 107 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1101 Mal-Chr1 13610752 13616314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1101 4 528 AGC Kinase Gene Family AT4G14350 80.571 0.0 870
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Mal1g1101 Pkinase 1.4e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1101 K08790 - gmx:100783095 994.956