LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal1g1040	ATGGCTAAGGAACAGTTGAAGGTTCTTGATGCACTTGATGTAGCCAAAACACAATGGTATCATTTTACTGCAATTGTCATTGCTGGAATGGGTTTCTTCACTGATTCATATGATCTCTTCTGCATTTCCCTTGTCACCAAATTGCTTGGCCGTGTTTATTACTATGAAGGCGGTAACAAACCCGGTTCTCTCCCAGATAATGTTTCTGCTGCAATCAATGGTGTTGCCTTCTGTGGAACACTGGCAGGACAACTTTTCTTTGGTTGGCTTGGTGACAAAATGGGAAGAAAACGTGTTTATGGAATGACTCTTATGCTTATGGTCATATCTTCACTTGCTTCTGGTCTCTCTTTTGGGAAAGATCCCAAAACTGTTGTGGCAACACTTTGTTTCTTCAGGTTTTGGCTTGGATTTGGAATTGGTGGTGATTACCCTCTTTCAGCTACTATCATGTCTGAGTATGCAAATAAAAAGACTCGCGGTGCATTTATAGCTGCTGTTTTCGCTATGCAAGGCTTCGGAATTTTGGCTGGAGGCGCGGTTGCGATTATAGTTTCATCTGCTTTCAAAGCTTTGTATCCTGCTCCAGAGTTTAATGTTAATCCGGTTTTATCCACTGTTCCACAAGCTGATTATGTTTGGAGGATAATCTTGATGTTTGGCGCGATTCCGGCTTTGCTTACTTACTATTGGAGGATGAAAATGCCTGAAACTGCAAGATATACTGCCTTAGTTGCAAAGAATGGTATACAGGCTGCTGCAGATATGTCAAAAGTTTTGCAAGTTGAGATAGAAGCTGAACAGGAAAAACTCGAGAAATTGGATCAAAATCAAAAACAAGGAGGGAATGATTTTGGTTTGTTTACAAAAAGGTTTCTTCGCCGCCATGGACTTCACTTGCTTGGAACTGCTATGACTTGGTTCTTGTTGGACATTGCTTATTATAGTCAGAATCTTTTCCAAAAAGATATTTTCAGTGCAATTGGATGGATTCCAGAAGCTAAAACTATGAATGCCCTTGAAGAGGTTTACAAGATTGCTAGAGCACAGACACTCATAGCACTTTGCAGCATGTATTCATTGACATTCTTCTTTGCAAATTTCGGTCCAAATGCAACGACGTTTGTGGTGCCAGCGGAGATTTTCCCGGCAAGGCTAAGGTCAACATGTCATGGTATATCAGCTGCTGCTGGAAAAGCTGGAGCAATGGTAGGTGCTTTTGGTTTCTTGTATGCTCAAAATGCAATTGGAGTGAGAAATGTGCTTCTACTTTTAGGTGTGGCCAATTTGTTGGGAATGATGTTTACATTCTTGGTGCCTGAATCTAAAGGAAAATCTTTGGAAGAGATTTCTGGTGAAGCTGAGGAAGAAACTGATGTTAATAAAGAATCTGCATTGGAGGCTGGTCTTCAAGTTTAG	1419	0.4087	MAKEQLKVLDALDVAKTQWYHFTAIVIAGMGFFTDSYDLFCISLVTKLLGRVYYYEGGNKPGSLPDNVSAAINGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVISSLASGLSFGKDPKTVVATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGAVAIIVSSAFKALYPAPEFNVNPVLSTVPQADYVWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNGIQAAADMSKVLQVEIEAEQEKLEKLDQNQKQGGNDFGLFTKRFLRRHGLHLLGTAMTWFLLDIAYYSQNLFQKDIFSAIGWIPEAKTMNALEEVYKIARAQTLIALCSMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAMVGAFGFLYAQNAIGVRNVLLLLGVANLLGMMFTFLVPESKGKSLEEISGEAEEETDVNKESALEAGLQV*	473

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal1g1040	472	SUPERFAMILY	MFS general substrate transporter	11	451	IPR036259	-
	Mal1g1040	472	MobiDBLite	consensus disorder prediction	448	463	-	-
	Mal1g1040	472	Coils	Coil	257	277	-	-
	Mal1g1040	472	MobiDBLite	consensus disorder prediction	448	472	-	-
	Mal1g1040	472	Pfam	Sugar (and other) transporter	352	451	IPR005828	GO:0016021\|GO:0022857\|GO:0055085
	Mal1g1040	472	Pfam	Sugar (and other) transporter	25	326	IPR005828	GO:0016021\|GO:0022857\|GO:0055085
	Mal1g1040	472	PANTHER	SOLUTE CARRIER FAMILY 22 MEMBER	358	463	-	-
	Mal1g1040	472	PANTHER	SOLUTE CARRIER FAMILY 22 MEMBER	4	357	-	-
	Mal1g1040	472	PANTHER	INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE	358	463	-	-
	Mal1g1040	472	PANTHER	INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE	4	357	-	-
	Mal1g1040	472	CDD	MFS_PhT	25	443	-	-
	Mal1g1040	472	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	24	444	IPR020846	GO:0022857
	Mal1g1040	472	Gene3D	MFS general substrate transporter like domains	20	264	IPR036259	-
	Mal1g1040	472	Gene3D	MFS general substrate transporter like domains	356	467	IPR036259	-
	Mal1g1040	472	Gene3D	MFS general substrate transporter like domains	279	355	IPR036259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal1g1040	Mal-Chr1	12682407	12683825	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal1g1040	1	459	Inorganic Solute Cotransporters	AT3G54700	69.202	0.0	719

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal1g1040	K08176		-	gmx:100802365	796.193