Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1032 ATGGATTCAAGTTCAACCTCAATTCCAAACTCTTCCACTTCAGATTTCTCATCAGAATCCTCCTCCTATGAATTAAATTACCTCCCCTTCAACGAGAACGATCCCGAAGAGATGCTTCTCTACGGTATGATCAACGACGCAAACAACCTCAACAACACAACAATGAAGGAAGAAGAGGTAAGTTCCGAAGAGAATGAACCAAGGAAGGAGAAGTCGTACCGAGGTGTAAGAAGAAGACCATGGGGGAAATTTGCAGCAGAGATAAGGGATTCAACGAGGAATGGAATGAGGGTTTGGTTAGGAACTTTTGATAGTGCTGAAGCAGCTGCTATGGCTTATGATCAAGCTGCTTTTTCCATGAGAGGTTCTTCTGCAATACTCAATTTTCCTGTTGAGGTTGTGAGAGAATCGCTTAGTGATATGAATTGTGATGATGGTTCTGAAGATGGGTGTTCCCCTGTTGTTGCTCTCAAGAGAAAACATTCCTTGAGAAGGAAAATTGGTTTCAAGAGAAACAAAGAAAGAGATTTTAGGAGCAATAATAGTAGTGTTGATAATGCTGTTGTGTTTGAAGATCTTGGTGCTGATTATTTGGAACAATTGTTGATTTCATCTGATGAACTTCCCTGTCCTAAGTGA 639 0.4069 MDSSSTSIPNSSTSDFSSESSSYELNYLPFNENDPEEMLLYGMINDANNLNNTTMKEEEVSSEENEPRKEKSYRGVRRRPWGKFAAEIRDSTRNGMRVWLGTFDSAEAAAMAYDQAAFSMRGSSAILNFPVEVVRESLSDMNCDDGSEDGCSPVVALKRKHSLRRKIGFKRNKERDFRSNNSSVDNAVVFEDLGADYLEQLLISSDELPCPK* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1032 212 CDD AP2 71 131 IPR001471 GO:0003700|GO:0006355
Mal1g1032 212 SUPERFAMILY DNA-binding domain 72 132 IPR016177 GO:0003677
Mal1g1032 212 ProSiteProfiles AP2/ERF domain profile. 72 130 IPR001471 GO:0003700|GO:0006355
Mal1g1032 212 SMART rav1_2 72 136 IPR001471 GO:0003700|GO:0006355
Mal1g1032 212 MobiDBLite consensus disorder prediction 55 74 - -
Mal1g1032 212 Gene3D AP2/ERF domain 71 133 IPR036955 GO:0003700|GO:0006355
Mal1g1032 212 MobiDBLite consensus disorder prediction 1 21 - -
Mal1g1032 212 MobiDBLite consensus disorder prediction 57 73 - -
Mal1g1032 212 Pfam AP2 domain 72 122 IPR001471 GO:0003700|GO:0006355
Mal1g1032 212 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 23 204 - -
Mal1g1032 212 PANTHER DNA-BINDING DOMAIN 23 204 IPR044808 GO:0003700|GO:0009873
Mal1g1032 212 PRINTS Ethylene responsive element binding protein signature 112 132 IPR001471 GO:0003700|GO:0006355
Mal1g1032 212 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1032 Mal-Chr1 12531195 12531833 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1032 28 206 AP2-EREBP Transcription Factor Family AT3G23240 63.889 3.27e-76 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mal1g1032 AP2 7.2e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1032 K14516 - gmx:100790598 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1032 1 12531195 12531833 Mal1g1032 1 12531195 12531833 ECH