Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1031 ATGGAGGATCACCACAAGGGAAAGCATGGCAAGGAGGAGAAGGGAAAGGAAGAGGTTCGATTCCGAGGCGTGAGGAGGAGGCCGTGGGGGAAGTATGCGGCGGAGATAAGGGATCCATCAAAGCAAGGGACAAGGATGTGGTTAGGGACATTTGATACGGCTGAAGAAGCAGCAAGAGCTTATGATCGAGCAGCTTTTAACTTGAGGGATCATCTTGCAATTTTGAATTTTCCTAGTGAGTATTATTCTAAAATAAGAGGCTCACCACCATATCCACCTCATTTAGCACCACCATCTTACACCTCTTCATCATCTCATCATGCTAGTGGTAGTTCTTCTGGGCCACAACATAGGCCCATTTTTGAGTTTGAGTGTTTGGATGATAAGATATTGGAGGAACTTCTTGGGTCAGAAGAGGTGAAGAAGAAAAAGTAG 435 0.4552 MEDHHKGKHGKEEKGKEEVRFRGVRRRPWGKYAAEIRDPSKQGTRMWLGTFDTAEEAARAYDRAAFNLRDHLAILNFPSEYYSKIRGSPPYPPHLAPPSYTSSSSHHASGSSSGPQHRPIFEFECLDDKILEELLGSEEVKKKK* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1031 144 ProSiteProfiles AP2/ERF domain profile. 20 78 IPR001471 GO:0003700|GO:0006355
Mal1g1031 144 CDD AP2 20 78 IPR001471 GO:0003700|GO:0006355
Mal1g1031 144 SUPERFAMILY DNA-binding domain 21 79 IPR016177 GO:0003677
Mal1g1031 144 MobiDBLite consensus disorder prediction 86 119 - -
Mal1g1031 144 Gene3D AP2/ERF domain 19 79 IPR036955 GO:0003700|GO:0006355
Mal1g1031 144 PANTHER ETHYLENE RESPONSE FACTOR 1 139 - -
Mal1g1031 144 Pfam AP2 domain 20 70 IPR001471 GO:0003700|GO:0006355
Mal1g1031 144 MobiDBLite consensus disorder prediction 1 22 - -
Mal1g1031 144 PANTHER DNA-BINDING DOMAIN 1 139 IPR044808 GO:0003700|GO:0009873
Mal1g1031 144 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Mal1g1031 144 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Mal1g1031 144 MobiDBLite consensus disorder prediction 98 116 - -
Mal1g1031 144 SMART rav1_2 20 84 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1031 Mal-Chr1 12471650 12472084 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1031 18 142 AP2-EREBP Transcription Factor Family AT3G23230 64.000 1.27e-49 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal1g1031 AP2 8.3e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1031 - - gmx:100793703 194.897