Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1030 ATGAGTGAAGATGGATCAAGGGGAAGGGTGAAGGACGACGGCGGACATGTCAAGTACCGCGGTGTTCGCTGCCGCCCATGGGGGAAGTTTGCGGCCGAGATTCGCGACTCCAATAGGCAGGGTCAGAGGGTGTGGCTTGGAACTTTCAACACTGCTGAGGAAGCTGCTAGAGCTTATGATAGAGCTGCTTTTAATATGAGAGGTTCATTCGCAATCCTTAATTTTCCAAATGAGTACACTATGGTTGCTGGTGCCGGTGCCGGTTCCGGTTCCGGTGCCGGTACTGGTTCATCTTCAAGGAATGCAAATGCTGAAGGCAGAGGAAACCAAGTGTTTGAGTTTGAGTACTTGGATGATAACTTGTTGGAGGAGCTTCTTGATGTTGAGGAGAAAAAGAATAAAGGATCCTGA 411 0.4939 MSEDGSRGRVKDDGGHVKYRGVRCRPWGKFAAEIRDSNRQGQRVWLGTFNTAEEAARAYDRAAFNMRGSFAILNFPNEYTMVAGAGAGSGSGAGTGSSSRNANAEGRGNQVFEFEYLDDNLLEELLDVEEKKNKGS* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1030 136 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Mal1g1030 136 MobiDBLite consensus disorder prediction 87 106 - -
Mal1g1030 136 CDD AP2 18 77 IPR001471 GO:0003700|GO:0006355
Mal1g1030 136 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Mal1g1030 136 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Mal1g1030 136 PANTHER OS09G0571700 PROTEIN 12 130 - -
Mal1g1030 136 SUPERFAMILY DNA-binding domain 18 77 IPR016177 GO:0003677
Mal1g1030 136 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Mal1g1030 136 PANTHER DNA-BINDING DOMAIN 12 130 IPR044808 GO:0003700|GO:0009873
Mal1g1030 136 Pfam AP2 domain 18 68 IPR001471 GO:0003700|GO:0006355
Mal1g1030 136 MobiDBLite consensus disorder prediction 91 106 - -
Mal1g1030 136 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1030 Mal-Chr1 12445015 12445425 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1030 13 132 AP2-EREBP Transcription Factor Family AT3G23230 60.800 2.27e-43 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal1g1030 AP2 1.7e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1030 - - aip:107615822 155.992