Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1025 ATGTCGAGTCATAATAATCGTCGTTCATCGTTTTCTTCTTCAACAACGTCGTCTATGGCGAAACGAAACCCTCCTGTTACTGCTTTAGCATCAGAGAACAACGCCGGAAAAGTTTTAGCCGCCTCTGCCAAGAAACGTCCTCCTCTCACTAACCTCACCAATCAAAATTCTTCCCGCAACAACTCATCCACTTTGGTGACTAAAGTTGCAAAGACTAAGAAAGAACCTACACCATGCAATTCTTCTTCAAGCTCAGTGATTTCTGTTAACAAAAAACCTACTTTGTCGAATGTTAAATCAGCTACTGTTGTTTTTCCTAAGGCCATTACTGCTAATTCTTCATTTTCTGAAAGGAATGAAGTTGTTCCTCCTCCATTGGTTGCTCCTCCTCCTCCTACTACCTTCAATGTTCCGGTTTCGAGTAGTATGGATTTGTCGTCTCCTGGTAAATCCGATGGAATGTCGGTTTCTATGGACGAGACAATGTCGTCTTGTGATTCTTTCAAGAGTCCTGATATTGAATATGTGGATAACAGTGATGTTCCAGCTGTTGATTCTATTGAGAGGAAGACTTTTTGTAGTCTTAACATTTCTGATTCTAATTACCCATCAGGTAACATTTGTAGTAGAGACATTCTTGTTGAGTTGGAAAAAGGGGAGAAAATTGTTAATATTGATAATGATTACATGGATCCTCAGCTCTGTGCTACCTTTGCTTGTGATATCTACAAGCATTTACGTGCATCTGAGTCAAAGAAAAGGCCATCCACAGACTTCATGGAGAAAATTCAGAAGGACATAAATCCCAGCATGCGTGCTATATTGATTGACTGGCTAGTGGAGGTGGCTGAAGAGTATAGACTTGTACCCGATACGTTGTATTTGACAATAAACTACATCGATCGGTATCTTTCCGGGAATCCGATGAACAGACAACAATTACAATTACTTGGAGTTGCTTCTATGATGATTGCCTCTAAATACGAGGAGATTTGTGCACCTCAGGTGGAGGAATTTTGTTATATAACTGATAACACATACTTCAAGGAAGAGGTTTTGCAGATGGAATCTACTGTCTTGAATTTTCTGAAATTCGAAATGACTGCCCCAACAATTAAATGCTTCTTGAGAAGATTTGTACGTGCAGCTCAAGGAATTGATGAGATCCCTTCACTACAACTAGAGTGCTTGACAAACTATATCGCCGAATTATCTCTGTTGGAGTACAGTATGCTTTGTTATGCTCCATCACTAATAGCAGCTTCTTCAATTTTTCTGGCCAAATATATGCTTTTCCCTTCAATGAAACCATGGAATCCAACATTGCAGCATTACACTCAATACCAGCCTGCTGATTTGTGTGCTTGTGTAAAAGATCTTCACCGTCTTTGTTGCAACAGCCCTAATTCTAATTTGCCTGCAATTAAGGAGAAATACAATCAGCACAAGTATAAATATGTGGCCAAGAAGTACTGCCCTCCTTCAATACCTCAAGAATTTTTCCAGAACTGA 1512 0.3968 MSSHNNRRSSFSSSTTSSMAKRNPPVTALASENNAGKVLAASAKKRPPLTNLTNQNSSRNNSSTLVTKVAKTKKEPTPCNSSSSSVISVNKKPTLSNVKSATVVFPKAITANSSFSERNEVVPPPLVAPPPPTTFNVPVSSSMDLSSPGKSDGMSVSMDETMSSCDSFKSPDIEYVDNSDVPAVDSIERKTFCSLNISDSNYPSGNICSRDILVELEKGEKIVNIDNDYMDPQLCATFACDIYKHLRASESKKRPSTDFMEKIQKDINPSMRAILIDWLVEVAEEYRLVPDTLYLTINYIDRYLSGNPMNRQQLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESTVLNFLKFEMTAPTIKCFLRRFVRAAQGIDEIPSLQLECLTNYIAELSLLEYSMLCYAPSLIAASSIFLAKYMLFPSMKPWNPTLQHYTQYQPADLCACVKDLHRLCCNSPNSNLPAIKEKYNQHKYKYVAKKYCPPSIPQEFFQN* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1025 503 MobiDBLite consensus disorder prediction 47 87 - -
Mal1g1025 503 MobiDBLite consensus disorder prediction 1 30 - -
Mal1g1025 503 Pfam Cyclin, N-terminal domain 241 367 IPR006671 -
Mal1g1025 503 PANTHER CYCLINS 34 502 IPR039361 -
Mal1g1025 503 Pfam Cyclin, C-terminal domain 370 489 IPR004367 -
Mal1g1025 503 PANTHER CYCLIN-A1-1 34 502 - -
Mal1g1025 503 Gene3D - 255 368 - -
Mal1g1025 503 CDD CYCLIN 271 360 IPR013763 -
Mal1g1025 503 MobiDBLite consensus disorder prediction 1 87 - -
Mal1g1025 503 SMART cyclin_7 374 462 IPR013763 -
Mal1g1025 503 SMART cyclin_7 277 361 IPR013763 -
Mal1g1025 503 Gene3D - 241 489 - -
Mal1g1025 503 SUPERFAMILY Cyclin-like 370 495 IPR036915 -
Mal1g1025 503 SMART Cyclin_C_2 370 493 IPR004367 -
Mal1g1025 503 PIRSF Cyclin_A_B_D_E 2 500 IPR039361 -
Mal1g1025 503 MobiDBLite consensus disorder prediction 139 161 - -
Mal1g1025 503 CDD CYCLIN 368 461 IPR013763 -
Mal1g1025 503 ProSitePatterns Cyclins signature. 272 303 IPR006671 -
Mal1g1025 503 SUPERFAMILY Cyclin-like 231 367 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1025 Mal-Chr1 12310198 12313353 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1025 6 503 Core Cell Cycle Gene Families AT1G44110 59.163 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1025 K06627 - gmx:547781 707.212