Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1020 ATGTTTACTCGAAGCCGACGCTTCGCTTCTTCATCTTCTTCCTCCGAGAAGAAGTCCTCCGTTGCAGAGAATCCAAATTCAAACAAGAAGGTTGCCGCCGTGAAGACTCGCTTAACGAAGAAACGTCCCGCTCTCGCCGACGTAACCAATAACAGAAATGCCTCTCTCGTCAAGACCTCCCTTGCTGCTCCATCCAAGCCCATGGTTCCATGTGTGTCCAAAACTGCAAAGACAAAGAAGGATTCTATTGCGAGTTCCCAGAAAAATGTTAAGTCTGAGAACATTTTGCCACCCTCTTTGAGAGTAAAATCAAGTGGATTTCTGCTTCGCAAAGAGGCTTGTTCGACCAAAGCTAGTCAAACAAAGACTGGAGTTCAATCTTTCATTGCTCCAAGCAATGATAGTGCTGTTTGTCCTGATTTTAAGAGTGTGGTCTCCACTCCGAGATGGATGGACATTTACCCAAGTAATTCCTTTAGCGGTTCTGCTTCACTGGATGAGAGCATGTCAACCAGTGATTCTTTGATGACTCCGGAATTTGAATATATTCGCAATGATGATGTTGTATCAATCAAACCAATTGAGAATAAAACATGCAACATTCTCAATATTTCAGACTCTTCCAAAATGGCAGGGAGAATACATGATATTGACACCATACTGAAGTCAAGAGCAAATGAAATTGCAGACATTGACTGCAATATCAAAGACCCACAGTTTTGTGCATCCTTTGCCCATGAAATCTATGAAAATTTGCGTGTATCAGAGAAAAATAAAAGGCCATCTATGGAATACATGGAGAAGATACAGAAAAACATCAACGCTAGCATGCGGGCAATGCTTATTGATTGGCTTGTGGAGGTTGCCGATGAGTACAGACTTCTACCTGATACACTATTTTTGGCAGTTAACTACCTCGATCGCTATCTTTCAGGCAAAGCAATGAACACACAGAGGTTACAACTACTTGGTGTTACCTGCATGATGATTGCTGCTAAATACGAGGAGATCTGTGCCCCCAAGGTGGAAGAGTTCTGTTATGTAACTGATAATACATACTCTAAGGGGCAGGTGTTAGAGATGGAGTCCTCTGTTCTGAATTTCTTGAAGTTTGAAATGACAGCTCCTACAACTAGATGCTTTTTGAGACGCTTCGTTATTGTTGCCCAACAAACGATTGAGGCTCCATTGATGCAGTTGGAGTATTTGGCCGACTATGTAGCAGAGTTATCACTTCTAGAGTATGATATGATTAAGTACACCCCGTCACTAATAGCTGCATCAGCCGCTTTCTTGGCTAAATATATACTACTTCCTAGGAAGAAACCTTGGAACTCTATGCTAAGGCATTACACAGGTTACCAAGCATCAGAATTGCGTGAATGTGTTAAGGGATTGCATTTGTTGTACTGCAATGGCTATCATAATTCACCTTCTATTACTGCTATCAGAGAGAAATACAGTCAGCATAAGTTCAAGTTTGTGGCGAAGAAGTATTGTCCTCCATCAATACCAGTAGAAGTATTTCACAACTGA 1536 0.4167 MFTRSRRFASSSSSSEKKSSVAENPNSNKKVAAVKTRLTKKRPALADVTNNRNASLVKTSLAAPSKPMVPCVSKTAKTKKDSIASSQKNVKSENILPPSLRVKSSGFLLRKEACSTKASQTKTGVQSFIAPSNDSAVCPDFKSVVSTPRWMDIYPSNSFSGSASLDESMSTSDSLMTPEFEYIRNDDVVSIKPIENKTCNILNISDSSKMAGRIHDIDTILKSRANEIADIDCNIKDPQFCASFAHEIYENLRVSEKNKRPSMEYMEKIQKNINASMRAMLIDWLVEVADEYRLLPDTLFLAVNYLDRYLSGKAMNTQRLQLLGVTCMMIAAKYEEICAPKVEEFCYVTDNTYSKGQVLEMESSVLNFLKFEMTAPTTRCFLRRFVIVAQQTIEAPLMQLEYLADYVAELSLLEYDMIKYTPSLIAASAAFLAKYILLPRKKPWNSMLRHYTGYQASELRECVKGLHLLYCNGYHNSPSITAIREKYSQHKFKFVAKKYCPPSIPVEVFHN* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1020 511 PANTHER CYCLINS 29 510 IPR039361 -
Mal1g1020 511 Gene3D - 261 374 - -
Mal1g1020 511 ProSitePatterns Cyclins signature. 278 309 IPR006671 -
Mal1g1020 511 MobiDBLite consensus disorder prediction 1 33 - -
Mal1g1020 511 CDD CYCLIN 374 467 IPR013763 -
Mal1g1020 511 SMART cyclin_7 380 468 IPR013763 -
Mal1g1020 511 SMART cyclin_7 283 367 IPR013763 -
Mal1g1020 511 Pfam Cyclin, C-terminal domain 376 497 IPR004367 -
Mal1g1020 511 PIRSF Cyclin_A_B_D_E 1 510 IPR039361 -
Mal1g1020 511 SUPERFAMILY Cyclin-like 236 373 IPR036915 -
Mal1g1020 511 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 29 510 - -
Mal1g1020 511 Gene3D - 247 497 - -
Mal1g1020 511 Pfam Cyclin, N-terminal domain 247 373 IPR006671 -
Mal1g1020 511 MobiDBLite consensus disorder prediction 1 49 - -
Mal1g1020 511 CDD CYCLIN 277 366 IPR013763 -
Mal1g1020 511 SMART Cyclin_C_2 376 501 IPR004367 -
Mal1g1020 511 SUPERFAMILY Cyclin-like 376 503 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1020 Mal-Chr1 12219684 12225028 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1020 25 511 Core Cell Cycle Gene Families AT1G44110 49.796 1.38e-158 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1020 K06627 - jre:108999040 563.148