Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1013 ATGCAACATCAAGAAGTGAATAATGGCAACAACAATCGCATAGTAGCTGTCAATGTGACCCCTTCTAGCACACCATCTTATAACCATGATGACTCCTCAAAGCAAGATCAGAAACCAGGATGGAAAAAGTTTTTGGCATATGTAGGTCCCGGTTTTCTCGTCTCATTGGCCTACCTTGATCCTGGAAACATGGAAACTGATTTGCAAGCTGGAGCTAACCACGGATATGAGCTGCTATGGATCATACTTATTGGACTCATATTTGCATGTATAATTCAATCATTGGCTGCAAATCTTGGAGTATGCACCGGAAAACACCTTTCAGAAATTTGTAAAGCTGAGTATCCATGGTTTGTGAAATATTGCTTATGGATATTAGCAGAGCTTGCTGTCATTGCTGCAGACATACCTGAAGTGATTGGGACAGCCTTTGCGCTTAACATACTCTTCCACATCCCAGTATGGGGAGGAGTTCTCTTGACTGGATGCAGCACTCTATTGTTTTTGGGTCTGCAAAGATTTGGGGTGAGGAAGTTGGAACTGTTGATATCAATTCTAGTATTTGTAATGGCTGCATGTTTCTTTGGGGAAATGAGTTATGTAAAACCCCCTGCTAAGGGTGTAATTGAAGGAATGTTTGTCCCTAAACTCAATGGAAATGGTGCTGTAGCTGATGCTATTGCCCTTTTGGGTGCCCTTATCATGCCGCACAATCTTTTCCTTCACTCTGCTCTGGTGTTGTCTAGAAAAATACCCGGTTCTAAGCGCGGTATCAATGATGCATGTAGATACTTTCTCATTGAGAGTGGTTTTGCTTTGTTCGTTGCATTTCTAATCAATGTTGCAATGATTTCTGTGACTGGCACTGTTTGCAAAGCCGATAATCTTTCTGGAGAGAATACCGATCGTTGCAATGATATTACCCTTAACTCTGCTTCTTTCCTTCTCCAGAATGTGTTGGGACGTTCAAGCTCAACTATTTATGCCATAGCATTGCTAGCCTCAGGACAAAGTTCTGCCATCACTGGAACCTATGCAGGCCAATTTATCATGCAGGGTTTCTTGGACTTAAAGATGAAAAAATGGATAAGAAACTTGGTGACTAGGGTTGTCGCCATAGCACCAAGTCTTGTTGTCTCTATCATTGGTGGTTCTTCTGGAGCTGGAAGACTCATCATCATTGCATCGATGATACTTTCTTTTGAGCTTCCATTCGCTTTAATTCCACTCCTTAAGTTTAGCAGTAGCAGCACCAAGATGGGTCCTCACAAGAATTCTATCATTATCATAATCATCTCATGGATACTGGGTTTGGGAATCATTGGAATCAATGTTTACTACCTCATCACTGCTTTTGTGGGTTGGATAATTCATAACAGTCTACCAAAGGTGGCAAATGTATTCATTGGGATCATAGTGTTTCCTCTAATGGCACTCTATATTGTCTCAGTTATCTATCTAACATTCAGAAAAGACACTGTTGTAACATTTGTGGAGGTTAAGGATGACCCAGCAATGCAAACCCACGTGGAAAAGGGGTTTGTAAACAATGGTCAGTTAGAGTTGAGCCATGCTCCTTACAGAGAGGATTTAGCTGATATCACACATCCAGAGGGGCCTAGGTTTTAA 1629 0.415 MQHQEVNNGNNNRIVAVNVTPSSTPSYNHDDSSKQDQKPGWKKFLAYVGPGFLVSLAYLDPGNMETDLQAGANHGYELLWIILIGLIFACIIQSLAANLGVCTGKHLSEICKAEYPWFVKYCLWILAELAVIAADIPEVIGTAFALNILFHIPVWGGVLLTGCSTLLFLGLQRFGVRKLELLISILVFVMAACFFGEMSYVKPPAKGVIEGMFVPKLNGNGAVADAIALLGALIMPHNLFLHSALVLSRKIPGSKRGINDACRYFLIESGFALFVAFLINVAMISVTGTVCKADNLSGENTDRCNDITLNSASFLLQNVLGRSSSTIYAIALLASGQSSAITGTYAGQFIMQGFLDLKMKKWIRNLVTRVVAIAPSLVVSIIGGSSGAGRLIIIASMILSFELPFALIPLLKFSSSSTKMGPHKNSIIIIIISWILGLGIIGINVYYLITAFVGWIIHNSLPKVANVFIGIIVFPLMALYIVSVIYLTFRKDTVVTFVEVKDDPAMQTHVEKGFVNNGQLELSHAPYREDLADITHPEGPRF* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1013 542 PRINTS Natural resistance-associated macrophage protein signature 336 355 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mal1g1013 542 PRINTS Natural resistance-associated macrophage protein signature 151 170 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mal1g1013 542 PRINTS Natural resistance-associated macrophage protein signature 123 149 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mal1g1013 542 PRINTS Natural resistance-associated macrophage protein signature 176 197 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mal1g1013 542 PRINTS Natural resistance-associated macrophage protein signature 226 249 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mal1g1013 542 PRINTS Natural resistance-associated macrophage protein signature 364 381 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mal1g1013 542 PRINTS Natural resistance-associated macrophage protein signature 396 415 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mal1g1013 542 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 42 418 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mal1g1013 542 Hamap Divalent metal cation transporter MntH [mntH]. 28 452 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mal1g1013 542 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 34 537 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mal1g1013 542 Pfam Natural resistance-associated macrophage protein 65 426 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mal1g1013 542 PANTHER METAL TRANSPORTER NRAMP5 34 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1013 Mal-Chr1 12163154 12168557 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1013 18 534 Inorganic Solute Cotransporters AT1G80830 58.960 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1013 K21398 - gmx:100787785 868.611