Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1001 ATGGTTTTAGAAAAATCTGACTCTCTTGATGAAGTTAAAAATTTCTACAAAGCATTTTCTATTTCTAAGGTAGAAGGATTTGGAATTCGCACTCGCTCAACTAAAGAAATTTTTTGCAAATTTGTTTGCACTAATGCTGGTGAATATGTAGTTGCTAACAATGATAATGCAGAAAGCAGTATAACGACTAAGAAAAGGTGCTCAACTTCAAGAACCGGCTGTAATGCATCACTTGTTGTTTCAAAAGCACGAATGAGGCTTAAATGGACTATCATTACTTTTAGCAATGTCCATAATCATCCAATGGTTAGCCCCAGGAGTAATTTGGCTGCAAGGAGCCTTGTTGAAAAGTTTGATCAAGAGGGCTTACCTACTGGAAAAGTTGCAACAATGTTTAGCAATGAAGGTTCATCATACTCTAATAGGGATTGTTGGAATCATCTTAGAGATCTTCGCTCTAAAAATTTAGATGTTGGTGATGCTCAAGCTGTGTTTAACTTTTGTAAGAAAAAGCAGGCTGAGAATCCAAATTTCTTTTATGCTATACAATGTAATAATGAGTCTCGAATGATTAATTTTTTTTGGGTGGATGCAAGATCAAGATTAGCCTATAAAACTTTTGGAGATGCCGCTTCAGTTACATTTGATACAACATATAAGACCAACAAGTATAGCATGCCATTTGCACCTTTTACTGGGTTGAATCATCATCATCACCAATCCATTTTATTTGGATGTGCTTTGTTGCAAGATGAAACAGAGAGGTTCTTTACATGGTTGTTTGAAACTTGGCTTACGGCGATGGGTGGACAGGCTCCGATATCAATAATTACAGATCAAGATTTAGGAATGGGAGCTGCAATATCTAAGTTTCCTGAGAAGCTTTCACACATATACCATAAACATTCAATTTTCAAGCGTGATCTAAAAAAGTGTATACTTAATTGA 948 0.3565 MVLEKSDSLDEVKNFYKAFSISKVEGFGIRTRSTKEIFCKFVCTNAGEYVVANNDNAESSITTKKRCSTSRTGCNASLVVSKARMRLKWTIITFSNVHNHPMVSPRSNLAARSLVEKFDQEGLPTGKVATMFSNEGSSYSNRDCWNHLRDLRSKNLDVGDAQAVFNFCKKKQAENPNFFYAIQCNNESRMINFFWVDARSRLAYKTFGDAASVTFDTTYKTNKYSMPFAPFTGLNHHHHQSILFGCALLQDETERFFTWLFETWLTAMGGQAPISIITDQDLGMGAAISKFPEKLSHIYHKHSIFKRDLKKCILN* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1001 315 Pfam FAR1 DNA-binding domain 15 103 IPR004330 -
Mal1g1001 315 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 6 306 IPR031052 GO:0006355
Mal1g1001 315 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 6 306 - -
Mal1g1001 315 Pfam MULE transposase domain 213 292 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1001 Mal-Chr1 12054582 12057909 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g1001 MULE 1.6e-19 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1001 - - qlo:115970754 360.918