Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0991 ATGGCGGAGGAAACCTATCCCATGGACATCGACGGCGTCGCCGATAAGGGCAAAACTGTCATTGCCGCCGGTAACCCTTCCTTCGGTGGCAAAGCTTCGTTATGGGTCGAAAAGTATCGTCCTCAATCCCTCGACGATGTCGCAGCTCACCGTGACATCGTTGACACAATTGATAGATTGACTACTGAGAACAGATTACCGCATCTTCTGTTGTATGGTCCTCCTGGAACTGGTAAAACATCGACGATTCTCGCTGTGGCGAGGAAACTATATGGCGCGCAGTACCATAATATGATTTTGGAACTCAATGCTTCAGATGATAGAGGAATTGATGTTGTTAGACAGCAGATTCAAGATTTTGCTAGCACTCAGAGCTTATCTTTTGGCGTCAAGCCCTCTGTAAAACTGGTCTTGTTAGATGAAGCAGATGCCATGACGAAGGATGCCCAATTTGCATTACGTAGAGTTATTGAGAAATATACAAAGAGCACTAGGTTTGCACTTATCTGTAATCATGTAAACAAGATTATCCCAGCACTGCAATCAAGATGCACTCGGTTTCGGTTTGCCCCCCTTGATGCTGTCCATGTCACTGAAAGATTGAAACATGTTATTAATGCTGAAAGGCTTGATGTTCAAGACAATGGCTTATCTGCTCTTGTTCGGCTTAGCAATGGTGATATGAGAAAGGCATTGAATATTCTTCAGTCAACACATATGGCCTCTCAGAAGATTACTGAAGAAGCTGTTTACCTTTGCACTGGAAATCCATTGCCTAAAGACATTGAGCAAATATCCTGCTGGCTTCTAAATGAACAATATTCAGAAAGCTTTAAAAGAATATATGATATGAAAACAAGGAAAGGACTGGCTCTGATTGATATTGTAAGAGAAGTGACAATGTTTGTCTTTAAGATTAAGATGCCTCCAGCCGTTCGAGTGCAGTTGGTGAATGATTTGGCTGACATAGAGTACAGATTAACTTTTGGGTGCAACGATAAGCTTCAGCTTGGATCAGTTGTTGCTTCATTTACACGTGCTAGATCTGCACTGGTTGCTGCTGCTGCATAA 1071 0.4267 MAEETYPMDIDGVADKGKTVIAAGNPSFGGKASLWVEKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQSLSFGVKPSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVINAERLDVQDNGLSALVRLSNGDMRKALNILQSTHMASQKITEEAVYLCTGNPLPKDIEQISCWLLNEQYSESFKRIYDMKTRKGLALIDIVREVTMFVFKIKMPPAVRVQLVNDLADIEYRLTFGCNDKLQLGSVVASFTRARSALVAAAA* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0991 356 CDD HLD_clamp_RFC 192 254 - -
Mal1g0991 356 PANTHER REPLICATION FACTOR C SUBUNIT 5 31 352 - -
Mal1g0991 356 Gene3D - 29 191 IPR027417 -
Mal1g0991 356 Pfam Replication factor C C-terminal domain 257 343 IPR013748 -
Mal1g0991 356 SMART AAA_5 65 195 IPR003593 -
Mal1g0991 356 CDD AAA 53 191 - -
Mal1g0991 356 Pfam ATPase family associated with various cellular activities (AAA) 69 189 IPR003959 GO:0005524|GO:0016887
Mal1g0991 356 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 250 IPR027417 -
Mal1g0991 356 SUPERFAMILY post-AAA+ oligomerization domain-like 257 347 IPR008921 GO:0003677|GO:0006260
Mal1g0991 356 Gene3D - 195 256 - -
Mal1g0991 356 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 31 352 - -
Mal1g0991 356 Gene3D - 257 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0991 Mal-Chr1 11862187 11868067 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0991 1 355 Core DNA Replication Machinery Family AT1G77470 76.486 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0991 K10756 - gmx:100782652 606.675