Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0978 ATGAATTCGCCGACTGCGCAGTTTGTTTCCTCGAGAAGGATGAGTGTGTATGATCCTATTCACCAGATTAATATGTGGGGAGAAGGCTTCAAAAGTAACGGCAATTTAAGCGCATCCATGCCCTTAATTGATGAGGTGGACCTGAAGTTTGACAGTAGTCAGTCAGAGGATGCTTCTCATGGTATACTAGGAACATCTAACAAGTATGACCAAGAAGCTAGTAGACCTATTGATAAGATACAAAGGCGTCTTGCACAAAATCGAGAGGCTGCTCGTAAGAGCCGTCTGCGGAAAAAGGCTTATGTGCAGCAGCTAGAATCGAGTCGTTTGAAGTTGGTGCAGTTGGAGCAAGAGCTTGAACGCGTAAGACAGCAGGGAATGTATATGGGCGGTGGGTTGGATTCTAATAATATGTGTTTTGCTGGACCTGTGAATCCAGGAATTGCAGCCTTTGAGATGGAGTATGGACATTGGGTTGACGAGCAAAACCGGCAAATCTCGGAGATGAGAAATGCTTTAAACGCGCATATTAGTGACATAGAGCTTAGGATTCTGGTAGATGGTATGATGAATCACTATGCTGAAATCTATCGCATGAAATCTGCTGCTGCAAAATCAGATGTTTTCTACGTGATGTCCGGCATGTGGAAAACAACAGCTGAAAGATTTTTCTTGTGGATCGGTGGCTTTCGACCCTCTGAGCTTCTCAAGATTCTTGGTCCAATGATTGAACCATTGACAGAGCAACAACGACTGGATATCGATAACCTTGGACAATCATGTCAACAAGCAGAAGATGCCCTTTCACAAGGCATGGAGAAACTCCGGCAAACACTAGCCGATAGTGTAGCAGCTGGACAATTCATGGAAGGAACTTATATTCCACAGATGGCTACTGCAATGGAGAAGTTAGAAGCTCTTGTGTGCTTTGTGAATCAGGCTGACCATCTTCGGCAGGAAACCTTGCAACAAATGTCACGAATACTTACAATCCGTCAGTCAGCTCGATGCTTGCTTGCTTTGGGAGAATATTTCCAACGCCTGAGGGCTTTGAGCTCACTATGGTCTAATCGACCCCGAGAACCTGCTTAG 1092 0.4496 MNSPTAQFVSSRRMSVYDPIHQINMWGEGFKSNGNLSASMPLIDEVDLKFDSSQSEDASHGILGTSNKYDQEASRPIDKIQRRLAQNREAARKSRLRKKAYVQQLESSRLKLVQLEQELERVRQQGMYMGGGLDSNNMCFAGPVNPGIAAFEMEYGHWVDEQNRQISEMRNALNAHISDIELRILVDGMMNHYAEIYRMKSAAAKSDVFYVMSGMWKTTAERFFLWIGGFRPSELLKILGPMIEPLTEQQRLDIDNLGQSCQQAEDALSQGMEKLRQTLADSVAAGQFMEGTYIPQMATAMEKLEALVCFVNQADHLRQETLQQMSRILTIRQSARCLLALGEYFQRLRALSSLWSNRPREPA* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0978 363 Pfam bZIP transcription factor 79 117 IPR004827 GO:0003700|GO:0006355
Mal1g0978 363 CDD bZIP_HBP1b-like 79 131 - -
Mal1g0978 363 Gene3D - 78 128 - -
Mal1g0978 363 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 82 97 IPR004827 GO:0003700|GO:0006355
Mal1g0978 363 Coils Coil 98 125 - -
Mal1g0978 363 Coils Coil 159 179 - -
Mal1g0978 363 MobiDBLite consensus disorder prediction 56 75 - -
Mal1g0978 363 MobiDBLite consensus disorder prediction 56 71 - -
Mal1g0978 363 ProSiteProfiles DOG1 domain profile. 148 358 IPR025422 GO:0006351|GO:0043565
Mal1g0978 363 SMART brlzneu 75 135 IPR004827 GO:0003700|GO:0006355
Mal1g0978 363 PANTHER TRANSCRIPTION FACTOR TGA9 1 362 - -
Mal1g0978 363 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 77 121 IPR004827 GO:0003700|GO:0006355
Mal1g0978 363 PANTHER TRANSCRIPTION FACTOR TGA1 1 362 - -
Mal1g0978 363 Pfam Seed dormancy control 165 239 IPR025422 GO:0006351|GO:0043565
Mal1g0978 363 SUPERFAMILY Leucine zipper domain 79 119 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0978 Mal-Chr1 11715097 11717175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0978 1 363 Calmodulin-binding Proteins AT5G65210 68.207 0.0 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mal1g0978 DOG1 1.2e-31 No_clan