Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0977 ATGGCCGATCACTCAGACTCCGACTTATCTCCTCTCGTCCCTCCACTTCCTCCCTCCGACCCTTCCTCGATCGACCTTGAAGCCGGTCCTTCCGAACAAATTCAGTGTCGGATTTGTCTCGAAACCGATGGTAGGGATTTCATAGCTCCTTGTAAGTGCAAAGGCACTTCAAAATATGTTCATCGAGAGTGTTTGGATCATTGGCGATCTGTCAAGGAAGGGTTTGCATTTGCTCACTGCACTACCTGCAAGGCTCCATATCATTTGCGTGTTCATGTTGCTGCTGATAGGAAATGGAGAACCTTGAAATTTCGTTTTTTCGTCACCAGAGATATTTTGTCTATTTTTCTGGCTGTCCAACTTATTATTACCTCACTGGCATATTTGGTTTATCTAATAGATGGTTACCAGCAAAATTGGCTTCGTATTCTCTGGGGTTTTGATAGTGCACTGAGTTTCTACTATATATGTGGAGCCCTATTGTTTTTTGCCTTGCTTGGCCTTTCTGGGTGCTTCATTACTTGTTATGATCGAAGAGTTCGCAATGATTTGGCTCAACCTTGTAGAGAATTATGTCTTTGTTGCTGTCAACCTGGAGTTTGTGCTGAATGTCATTTGCCAGGCACTCTTTGTTTGTGGACTGATTGCACTGCATGCTTTGAGGGTTGTGGAACCATGGCAACAGAATGTGGTGGTTGTTTGGGGGGTGCTGGGGAAGCAGGGCTACCATTATTATTCATAATGGCTTTGATTGTTCTGGGACTTTTTACAGTAGTTGGGATATTTTACAGTGTATTGGTGGCAACTATGGTGGGTCAACGGATATGGCAACGTCACTATCACATACTTGCAAAAAGGATGTTAACAAAGGAGTATGTGGTTGAAGATGTCGATGGAGAGATGACAGGGTCTGATTGGTCTCCCCCAGCCCTCTCACCTGAGCATGTTCAACAATTGAAAACATTGGGCCTCTTATGA 978 0.4417 MADHSDSDLSPLVPPLPPSDPSSIDLEAGPSEQIQCRICLETDGRDFIAPCKCKGTSKYVHRECLDHWRSVKEGFAFAHCTTCKAPYHLRVHVAADRKWRTLKFRFFVTRDILSIFLAVQLIITSLAYLVYLIDGYQQNWLRILWGFDSALSFYYICGALLFFALLGLSGCFITCYDRRVRNDLAQPCRELCLCCCQPGVCAECHLPGTLCLWTDCTACFEGCGTMATECGGCLGGAGEAGLPLLFIMALIVLGLFTVVGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSDWSPPALSPEHVQQLKTLGLL* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0977 325 MobiDBLite consensus disorder prediction 1 24 - -
Mal1g0977 325 ProSiteProfiles Zinc finger RING-CH-type profile. 28 90 IPR011016 GO:0008270
Mal1g0977 325 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 6 325 - -
Mal1g0977 325 SMART ringv_2 35 84 IPR011016 GO:0008270
Mal1g0977 325 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 98 IPR013083 -
Mal1g0977 325 SUPERFAMILY RING/U-box 31 88 - -
Mal1g0977 325 CDD RING_CH-C4HC3_MARCH 36 84 - -
Mal1g0977 325 Pfam RING-variant domain 36 83 IPR011016 GO:0008270
Mal1g0977 325 PANTHER BNAA04G12620D PROTEIN 6 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0977 Mal-Chr1 11692873 11696384 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0977 1 325 C3H Transcription Factor Family AT2G22120 84.356 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0977 - - gmx:100791777 606.675