Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g0965 ATGGCAACTGCAATGACTTGGAGGTTTGCTTCAAACAATGGCACCACCCTTGCTGCTAATGATTTGGAAAGAAATGGTGATGGAAAGGCTCAAGATTCTGAGGCTCCAACTCCCCATTCTGTTTTAAAAATGGGAATGAGAGAACGTACCAGCAGCGGCATGGAGGATGTAGATGGGACATTAGCAAGTATTGCTCAATGCATTGAGCAGCTGCGTAAGAGCACATCTTCTTTGCAAGAGAAAGAGTACTCCTTGAAGCAATTATTGGAGCTTATTGATACACGTGAAAATGCTTTTAGTGCAGTTGGATCTCATTCTCAGGCAGTTCCGGTGCTTGTTTCCCTTCTCCGGTCAGGGTCATTGAGTGTGAAGATACAGGCAGCAACTGTCTTGGGCTCACTTTGTAAAGAAAATGAGTTAAGGGTGAAAGTCTTACTTGGAGGATGCATTCCTCCTTTGCTCGGTCTACTAAAGTCCAGTTCTGAAGAAGGTCAAGTAGCTGCTGCAAAGACAATTTTTGCTGTCTCTCAAGGTGATGCCAAAGATCATGTTGGATCAAAAATCTTTTCAACCGAAGGAGTTGTTCCAGTGCTCTGGGAACAGCTGCAAAAGGGCCTAAAGAGTGGAAGTGTAGTAGATAGTTTATTGACTGGAGCATTGAAAAATCTCTACAGCAGTACTGAGAGATTCTGGAATTCGACAATACAGGCTGGAGGAGTAGACATATTACTGAAGTTACTAACAACAGGACAGTCTAGCACTTTAGCAAATGTGTGCTTTTTACTTGCCTGTATGATGATGGAAGATGCATCTTTTTGTTCAAAGGTATTGACAGCAGATGCAACAAAACAACTCCTCAAACTTTTAGGCCCTGGTAATGATGCCCCAATTAGAGCTGAAGCAGCTGGTGCTATTAAATCTCTATCTGCCCAGTGCCAAGATGCAAGGAAAGAGATAGCCAATTCTAATGGCATTCCTGCTTTGATTAATGCTACCATAGCTCCTTCCAAAGAGTTCATGCAAGGTGAGTATGCTCAAGCAATACAGGAGAATGCTATGTGTGCTCTTGCGAACATCTCTGGTGGTTTGTCTTATGTCATCTCCAGCCTTGGTCAAAGCCTTGAATCATGCTCCTCACCGACCCAAACTGCCGACACGTTGGGAGCTTTAGCTTCAGCTCTTATGATATATGATGACAAGGCAGAATCTACTAGAGCATCAGATCCTTTGGCAGTTGAGCAGACATTACTCAAGCAATTTAAACCTCGCTCGCCCTTCCTTGTGCAGGAAAGGACCATTGAAGCCCTTGCTAGTTTGTATGGAAATCCTATACTCTCACTTAAACTTGCAAATTCTGATGCCAAGCGTTTGCTTGTTGGTCTAATAACAATGGCTGCTAATGAAGTGCAAGATGAGCTCTTAAAAGCTCTATTGACACTGTGCAATAGTGAATGCAGTCTATGGCGTGCACTTCAAGGCCGTGAAGGAGTTCAGCTGTTGATATCTCTTTTGGGGCTTTCATCAGAACAGCAACAAGAATGTGCTGTTGCCCTGCTCTGTCTTTTGTCTCATGAAAATGATGAAAGTAAATGGGCCATTACTGCTGCTGGTGGTATACCTCCACTTGTTCAAATTTTGGAGTCAGGATCTGCTAAAGCAAAGGAAGACTCGGCAACAATCCTCAGGAACCTATGTGATCACAGTGAGGATATACGTGCTTGTGTTGAAAGTGCTGATGCAGTTCCTGCATTGTTGTGGCTATTGAAGAATGGAAGCCCAAATGGGAAGGAGATTGCAGCTAAGACCTTGAATCACTTAATTCACAAATCTGATACGGCAACTATCAGTCAGCTTACAGCATTATTGACTAGTGATCTACCGGAGTCTAAGGTTTATGTTTTAGATGCTTTGAGGAGTATGCTTTCTGTTGTTTCTCTTAGTGACCTTCTACGTGAAGGTAGTGCTGCCAGTGATGCGATCGATACAATGATAAAATTATTGAGTTCCACAAAGGAAGAAACTCAGGCAAAGTCAGCATCAGCTTTGTCGGGAATTTTTGAAACAAGGAAAGATGTGCGAGAAAGCAATATTGCTGTTAAAGCTCTTTGGTCAGCTATGAAGTTGCTGAATGTTGAATCTGGAAGTATCTTAGTTGAGTCCTCACGCTGCCTAGCTGCAATATTTCTTTCTATCAAAGAGAACAGGGAGGTAGCCGCTAATGCTAGAGATGCATTATCCTCCCTAGTTGCACTAGCTAGCTCTTCAGTCTTGGAAGTAGCAGAGCTGGCAACATGTGCTGTGGCAAATCTTTTTTTGCATAGTGAAATTGCTGAGCATGCTGTTGCGGAGGAAGTTATTTTGCCTGCTACCAGAGTATTGCGTGAAGGCACAAAATCTGGAAAAACACATGCAGCAGCAGCAATTGCTCGCCTTTTGCATTCTAGGCAAGTTGATTATGCTGTAAATGATTGTGTGAATCGTGCTGGTACTGTTCTTGCATTAGTTTCTTTCTTAGATTCTGCTATTAATGAACCTGTTGCGACAACAGAGGCTCTAGAAGCACTTGCCATTTTGTCCAGGTTGAAAGAGACCACTGCACTTAGTAAACCTGCTTGGATGATTTTGGCCGAATTCCCCAAAAGCATAAGCCCAATAGTTCTGTCAATTGCTGATTCAACACCAGTGTTGCAGGATAAAGCTATTGAAGTATTATCTCGCTTATGTAAGAATCAGCCTTCCGTTTTAGGAGAGACTGTTGCTACTGCATCTGGATGTATATCTTCAATAGCTAAGAGGATAATCTATTCAACTTCTACAAATGTGAAGGTCAAAATTGGGGGAGCTGCAATTCTTATTTGTGCTGCTAAAGAAAGTCATCAAAGGCTTGTGGAGGATCTAAGTTTATCAAACTTGTGTGCTAATCTTGTACAGTCGCTTGTTGATATGCTTATTTCTTCACAGGCTACTTTGGTTAATCAGGACGATGTCAACGATGAACTCATCAGCATTTGCAGGCATACAAAAGACGCAAATGATGGTAAATTGACCAGCAACACCACTATTATATCTGGTGCTGATGTAGCTTTATGGTTACTGTCTGTTATTGCTTGTCATGATGAAAAGGGTAGAGTTGCAATAATGGAGGCTGGAGCGATTGAGATTCTCACTGACAGGATTGCAAATTTTTCCTCACAATACAGTCAGATTGACTATAAAGAAGATAGCAGCATGTGGATTTGTGCCATGTTGTTGGCAATATTATTTCAAGATAGGGATATCATTCGAGCACATGCAACAATGAAATCTATACCAGCCCTTGCCAATTTATTAAAGTCTGAGGAATCAGCAAACAAATATTTTGCTGCACAATCAATATCTAGCCTAGTCTGTAATGGTAGCAGGGGAACACTTTTATCTGTTGCAAATTCTGGGGCGGCAGGTGGACTTATCTCCTTGCTTGGCTGTGCTGATGTTGATATACAGGATCTCCTGGAATTGTCAAATGAATTTTCATTGGTGCCTTATCCCGATCAAGTGGCTCTTGAGAGGTTGTTTAGAGTTGATGACATTAGAGTTGGAGCCACTTCTCGGAAGGCAATACCTGCCCTAGTTGATCTGCTCAAACCGATTCCAGATCGCCCAGGAGCACCATTTTTAGCACTTGGGATTTTGACACAGCTTGCTAAAGATTGCCCATCAAATAAGATTGTAATGGTAGAGTCTGGGGTCATAGAGGCACTTACTAAGTATCTTTCACTGGGTCCACAAGATGCAATTGAAGAAGCTGCTACAGATCTGTTAGGTATTTTGTTTAGCAATGCTGAGATAAGGAGACATGAGTCAGCATTTGGTGCTGTTACTCAACTTGTAGCTGTGCTACGTTTAGGAGGAAGAGCTGCAAGGTATAGTGCTGCTAAAGCCTTGGAAAGTTTATTCTCGGCTGACAACATTAGAAATGCAGAGATTGCCCGGCAAGCTGTTCAACCCTTGGTGGAGATTCTTAATACTGGTTTAGAGAGAGAGCAACATGCTGCAATTTCTGCATTAGTTAAGTTATTGAGTGAAAATCCTTCAAGAGCTCTTGCTGTTGCTGATGTTGAGATGAATGCCATTGATGTTCTTTGCAAAATTCTTTCATCAGATTGTTCAATGGACCTCAAAGGGGATGCTGCTGAATTATGCTGTGTTCTTTTTGGAAATACAAGGATTCGATCCACAATGGCTGCTGCACGGTGTGTTGAACCTCTGGTCTCTCTCCTTGTAACTGAGTTTAGTCCTGCTCATCATTCAGTTGTCCGGGCTTTGGATAGGCTCGTTGGCGATGAGCAACTGGCTGAATTAGTTGCTGCACGTGGTGCTGTTATTCCTCTAGTTGGCCTACTTTTTGGTAGGAATTTTGTACTTCATGAGGCCATTTCCAGAGCTCTTGTCAAGTTAGGAAAAGATCGACCTGCTTGTAAAATGGAAATGGTGAAAGCTGGTGTCATTGAAAGCATACTTGACATCCTTCATGAAGCACCCGATTATCTTTGTGCAGCTTTTGCTGAATTGTTGCGTATATTGACCAATAATGCTAGCATAGCCAAAGGACCATCAGCTGCTAAAGTGGTTGAACCCCTGTTCTTTTTGCTAACAAGACAAGAATTTGGGCCCAATGGACAACATAGTGTGTTGCAGGTTTTGGTTAATATCTTAGAGCATCCGCAGTGCCGTGCTGATTACACATTAACTTCTCACCAAGCTATTGAACCACTCATCCCCTTGCTTGATTCTGCAATAGCTACAGAAGTGCAACAGTTGGTTGCCGAGCTTCTCTCCCATCTACTTTTAGAAGAACACCTTCAGAAGGATCCAGTGACACAGCAAGTAATTGGTCCTCTTGTGCGAGTTCTTGGTTCTGGCCTGCAAATATTGCAGCAGAGAGCTTTGAAGGCCCTTGTCAGTATTGCAATTGTATGGCCAAATGAAATTGCAAAAGAGGGTGGTGTTATTGAAATTTCCAAAGTGATATTGCAAGCTGACCCTTCCATTCCTCATGCTTTATGGGAGTCCGCTGCCTCTGTTTTGGCAAGTATTCTGCAATTTAGTTCTGAATTCTACTTGGAAATTCCTGTTGCTGTTTTGGTAAGATTGCTTCAATCTGGATCAGAGAGCACGATTAGTGGTGCATTAAATGCTCTTCTTGTGTTGGAAAGTGACGATGAAACTAGTGCAGCCGCAGAGGCAATGGCTGAAAGCGGTGCCATAGAGGCCCTCTTGGAGCTCCTTAGAACTCATCAGTGTGAGGACACTGCTGCAAGACTCTTAGAAGTATTGCTTAACAATGTAAAGATTAGAGAAACAAAAGTTACTAAATCAGCCATCTTACCATTATCCCAGTACCTCTTGGACCCACAATCTCAAGCACAACAAGCAAGGTTATTGGCGACTTTGGCTCTTGGTGATCTATTCCAGAATGAGGGTCTTGCTCGGACAGCTGATGCGGTCTCAGCTTGTCGTGCTTTAGTGAATGTGCTTGAAGAGCAACCCACTGAAGAAATGAAAGTCGTCGCCATATGTGCTCTGCAAAACCTTGTGATGTACAGTCGATCAAATAAAAGAGCAGTTGCAGAGGCCGGTGGGGTTCAGGTTATACTGGATCTGATTGGTTCAAGTGATCCTGAAACATCTGTTCAGGCTGCAATGTTTGTTAAACTTCTCTTTTCAAATCATACTATCCAAGAGTATGCTGTTAGTGAAACAGTCAGAGCAATAACTGCTGCTATTGAAAAGGATTTATGGGCTACTGGAACTGTGAATGACGAGTATCTTAAAGCCTTAAATTCTCTATTTAGCAACTTCCCACGACTGAGAGCAACTGAACCAGCAACACTTAGCATTCCACATCTGGTTACATCCTTAAAGACAGGTTCAGAGGCTACTCAGGAAGCTGCCTTGGATGCCCTTTTTCTGCTCAGGCAAGCTTGGTCAGCGTGCCCAGCAGAAGTTTCAAGAGCTCAGTCCATAGCAGCCGCAGATGCTATTCCTTTGTTACAGTACTTAATCCAATCTGGCCCACCTCGGTTTCAGGAGAAGGCAGAGTTTCTATTGCAGTGTTTGCCGGGGACATTGGTGGTGATTATCAAGTGCGGTAATAATATGAAGCAGTCTGTTGGAAACCCGAGTGTTTACTGCAAGCTTACTCTTGGAAACAATCCTCCAAGGCAAACCAAGGTGGTCTCAACTGGCCCTAACCCAGAGTGGGATGAGAGTTTCTCATGGTCCTTTGAGAGCCCTCCAAAAGGCCAGAAGCTTCTGATTTCTTGCAAAAACAAGAGTAAAATGGGGAAGAGTTCATTTGGGAAAGTGACAATCCAGATTGATCGGGTGGTGATGCTGGGGATAGTATCTGGAGAGTACACTCTATTGCCGGAAAGTAAAAGCGGCCCCTCAAGAAATTTAGAAATAGAATTTCAATGGTCTAACAAATGA 6471 0.4295 MATAMTWRFASNNGTTLAANDLERNGDGKAQDSEAPTPHSVLKMGMRERTSSGMEDVDGTLASIAQCIEQLRKSTSSLQEKEYSLKQLLELIDTRENAFSAVGSHSQAVPVLVSLLRSGSLSVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSEEGQVAAAKTIFAVSQGDAKDHVGSKIFSTEGVVPVLWEQLQKGLKSGSVVDSLLTGALKNLYSSTERFWNSTIQAGGVDILLKLLTTGQSSTLANVCFLLACMMMEDASFCSKVLTADATKQLLKLLGPGNDAPIRAEAAGAIKSLSAQCQDARKEIANSNGIPALINATIAPSKEFMQGEYAQAIQENAMCALANISGGLSYVISSLGQSLESCSSPTQTADTLGALASALMIYDDKAESTRASDPLAVEQTLLKQFKPRSPFLVQERTIEALASLYGNPILSLKLANSDAKRLLVGLITMAANEVQDELLKALLTLCNSECSLWRALQGREGVQLLISLLGLSSEQQQECAVALLCLLSHENDESKWAITAAGGIPPLVQILESGSAKAKEDSATILRNLCDHSEDIRACVESADAVPALLWLLKNGSPNGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKVYVLDALRSMLSVVSLSDLLREGSAASDAIDTMIKLLSSTKEETQAKSASALSGIFETRKDVRESNIAVKALWSAMKLLNVESGSILVESSRCLAAIFLSIKENREVAANARDALSSLVALASSSVLEVAELATCAVANLFLHSEIAEHAVAEEVILPATRVLREGTKSGKTHAAAAIARLLHSRQVDYAVNDCVNRAGTVLALVSFLDSAINEPVATTEALEALAILSRLKETTALSKPAWMILAEFPKSISPIVLSIADSTPVLQDKAIEVLSRLCKNQPSVLGETVATASGCISSIAKRIIYSTSTNVKVKIGGAAILICAAKESHQRLVEDLSLSNLCANLVQSLVDMLISSQATLVNQDDVNDELISICRHTKDANDGKLTSNTTIISGADVALWLLSVIACHDEKGRVAIMEAGAIEILTDRIANFSSQYSQIDYKEDSSMWICAMLLAILFQDRDIIRAHATMKSIPALANLLKSEESANKYFAAQSISSLVCNGSRGTLLSVANSGAAGGLISLLGCADVDIQDLLELSNEFSLVPYPDQVALERLFRVDDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGILTQLAKDCPSNKIVMVESGVIEALTKYLSLGPQDAIEEAATDLLGILFSNAEIRRHESAFGAVTQLVAVLRLGGRAARYSAAKALESLFSADNIRNAEIARQAVQPLVEILNTGLEREQHAAISALVKLLSENPSRALAVADVEMNAIDVLCKILSSDCSMDLKGDAAELCCVLFGNTRIRSTMAAARCVEPLVSLLVTEFSPAHHSVVRALDRLVGDEQLAELVAARGAVIPLVGLLFGRNFVLHEAISRALVKLGKDRPACKMEMVKAGVIESILDILHEAPDYLCAAFAELLRILTNNASIAKGPSAAKVVEPLFFLLTRQEFGPNGQHSVLQVLVNILEHPQCRADYTLTSHQAIEPLIPLLDSAIATEVQQLVAELLSHLLLEEHLQKDPVTQQVIGPLVRVLGSGLQILQQRALKALVSIAIVWPNEIAKEGGVIEISKVILQADPSIPHALWESAASVLASILQFSSEFYLEIPVAVLVRLLQSGSESTISGALNALLVLESDDETSAAAEAMAESGAIEALLELLRTHQCEDTAARLLEVLLNNVKIRETKVTKSAILPLSQYLLDPQSQAQQARLLATLALGDLFQNEGLARTADAVSACRALVNVLEEQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVILDLIGSSDPETSVQAAMFVKLLFSNHTIQEYAVSETVRAITAAIEKDLWATGTVNDEYLKALNSLFSNFPRLRATEPATLSIPHLVTSLKTGSEATQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKCGNNMKQSVGNPSVYCKLTLGNNPPRQTKVVSTGPNPEWDESFSWSFESPPKGQKLLISCKNKSKMGKSSFGKVTIQIDRVVMLGIVSGEYTLLPESKSGPSRNLEIEFQWSNK* 2157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g0965 2156 SUPERFAMILY ARM repeat 1180 1365 IPR016024 -
Mal1g0965 2156 SUPERFAMILY ARM repeat 660 989 IPR016024 -
Mal1g0965 2156 Coils Coil 298 318 - -
Mal1g0965 2156 SUPERFAMILY ARM repeat 1301 1615 IPR016024 -
Mal1g0965 2156 MobiDBLite consensus disorder prediction 16 39 - -
Mal1g0965 2156 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1198 1242 IPR000225 GO:0005515
Mal1g0965 2156 Gene3D C2 domain 2035 2156 IPR035892 -
Mal1g0965 2156 SUPERFAMILY ARM repeat 68 389 IPR016024 -
Mal1g0965 2156 Gene3D - 52 403 IPR011989 -
Mal1g0965 2156 Gene3D - 1657 2034 IPR011989 -
Mal1g0965 2156 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 19 2156 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Mal1g0965 2156 CDD C2 2037 2127 - -
Mal1g0965 2156 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2034 2153 IPR035892 -
Mal1g0965 2156 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 537 579 IPR000225 GO:0005515
Mal1g0965 2156 Gene3D - 654 869 IPR011989 -
Mal1g0965 2156 ProSiteProfiles C2 domain profile. 2016 2133 IPR000008 -
Mal1g0965 2156 Gene3D - 872 1169 IPR011989 -
Mal1g0965 2156 SMART arm_5 1441 1481 IPR000225 GO:0005515
Mal1g0965 2156 SMART arm_5 1736 1777 IPR000225 GO:0005515
Mal1g0965 2156 SMART arm_5 1483 1523 IPR000225 GO:0005515
Mal1g0965 2156 SMART arm_5 568 608 IPR000225 GO:0005515
Mal1g0965 2156 SMART arm_5 1400 1440 IPR000225 GO:0005515
Mal1g0965 2156 SMART arm_5 1568 1610 IPR000225 GO:0005515
Mal1g0965 2156 SMART arm_5 647 687 IPR000225 GO:0005515
Mal1g0965 2156 SMART arm_5 1313 1354 IPR000225 GO:0005515
Mal1g0965 2156 SMART arm_5 1186 1229 IPR000225 GO:0005515
Mal1g0965 2156 SMART arm_5 526 566 IPR000225 GO:0005515
Mal1g0965 2156 SMART arm_5 269 310 IPR000225 GO:0005515
Mal1g0965 2156 SMART arm_5 1231 1272 IPR000225 GO:0005515
Mal1g0965 2156 SMART arm_5 482 524 IPR000225 GO:0005515
Mal1g0965 2156 SMART arm_5 94 136 IPR000225 GO:0005515
Mal1g0965 2156 SMART arm_5 734 772 IPR000225 GO:0005515
Mal1g0965 2156 SMART arm_5 818 860 IPR000225 GO:0005515
Mal1g0965 2156 SMART arm_5 312 361 IPR000225 GO:0005515
Mal1g0965 2156 SMART arm_5 1862 1902 IPR000225 GO:0005515
Mal1g0965 2156 SMART arm_5 137 177 IPR000225 GO:0005515
Mal1g0965 2156 Gene3D - 1180 1366 IPR011989 -
Mal1g0965 2156 Pfam C2 domain 2035 2126 IPR000008 -
Mal1g0965 2156 PANTHER CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 19 2156 - -
Mal1g0965 2156 SUPERFAMILY ARM repeat 1028 1161 IPR016024 -
Mal1g0965 2156 Gene3D - 404 653 IPR011989 -
Mal1g0965 2156 Gene3D - 1367 1650 IPR011989 -
Mal1g0965 2156 SUPERFAMILY ARM repeat 1626 2033 IPR016024 -
Mal1g0965 2156 SUPERFAMILY ARM repeat 346 686 IPR016024 -
Mal1g0965 2156 SMART C2_3c 2036 2132 IPR000008 -
Mal1g0965 2156 Pfam Armadillo/beta-catenin-like repeat 105 135 IPR000225 GO:0005515
Mal1g0965 2156 Pfam Armadillo/beta-catenin-like repeat 526 566 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g0965 Mal-Chr1 11521511 11531046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g0965 489 621 U-box Gene Family AT2G23140 40.741 4.37e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g0965 - - gmx:100816765 3620.09